Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular
Predictor Summary:
Predictor Summary:
- endoplasmic reticulum 6
- golgi 5
- extracellular 6
- vacuole 4
- plasma membrane 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Bra023821.1-P | Field mustard | cytosol | 64.14 | 78.4 |
| CDY34247 | Canola | cytosol | 64.14 | 78.4 |
| CDX98212 | Canola | mitochondrion | 64.14 | 77.91 |
| AT4G14830.1 | Thale cress | cytosol | 56.06 | 73.03 |
| Bra039959.1-P | Field mustard | extracellular | 69.7 | 71.88 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 69.7 | 70.41 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 69.7 | 70.41 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 52.53 | 53.61 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 51.01 | 52.06 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 40.91 | 50.31 |
| Solyc09g061350.1.1 | Tomato | cytosol | 27.27 | 49.54 |
| PGSC0003DMT400075166 | Potato | cytosol | 32.83 | 47.79 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 41.92 | 47.43 |
| PGSC0003DMT400034952 | Potato | cytosol | 35.35 | 47.3 |
| Solyc09g061510.1.1 | Tomato | cytosol | 21.72 | 46.24 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 38.89 | 45.29 |
| PGSC0003DMT400042036 | Potato | cytosol | 38.38 | 45.24 |
| KRH77848 | Soybean | mitochondrion | 31.31 | 44.93 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 38.38 | 44.71 |
| Solyc09g082150.1.1 | Tomato | cytosol | 24.24 | 44.04 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 41.41 | 43.62 |
| EER92826 | Sorghum | cytosol | 36.36 | 42.6 |
| EER95920 | Sorghum | mitochondrion | 37.88 | 42.37 |
| Os07t0173100-00 | Rice | mitochondrion | 36.36 | 42.11 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 32.32 | 42.11 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 31.82 | 41.45 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 31.82 | 41.45 |
| Zm00001d018908_P001 | Maize | mitochondrion | 35.35 | 41.42 |
| Zm00001d007836_P001 | Maize | mitochondrion | 35.35 | 41.18 |
| Os03t0159900-01 | Rice | cytosol | 33.33 | 40.74 |
| Zm00001d027742_P001 | Maize | cytosol | 33.33 | 40.74 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 31.31 | 39.49 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 38.89 | 37.56 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 44.95 | 36.93 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 29.29 | 33.53 |
| HORVU4Hr1G073230.1 | Barley | plastid | 32.83 | 24.07 |
Protein Annotations
| MapMan:35.2 | EntrezGene:821824 | UniProt:A0A178VF21 | ProteinID:AEE76650.1 | ArrayExpress:AT3G22530 | EnsemblPlantsGene:AT3G22530 |
| RefSeq:AT3G22530 | TAIR:AT3G22530 | RefSeq:AT3G22530-TAIR-G | EnsemblPlants:AT3G22530.1 | TAIR:AT3G22530.1 | EMBL:AY072391 |
| Unigene:At.66480 | EMBL:BT000171 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005773 | GO:GO:0005774 | GO:GO:0008150 | GO:GO:0016020 | RefSeq:NP_566710.1 | ProteinID:OAP03563.1 |
| PO:PO:0000005 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000084 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001016 | PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 |
| PO:PO:0004507 | PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 |
| PO:PO:0007123 | PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 |
| PO:PO:0009009 | PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 |
| PO:PO:0009032 | PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 |
| PO:PO:0020100 | PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025195 | PO:PO:0025281 | PANTHER:PTHR33879 |
| PANTHER:PTHR33879:SF3 | UniProt:Q8VY73 | SignalP:SignalP-noTM | UniParc:UPI00000AC53A | SEG:seg | : |
Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
Coordinates
chr3:-:7977604..7978635
Molecular Weight (calculated)
22118.7 Da
IEP (calculated)
5.791
GRAVY (calculated)
-0.183
Length
198 amino acids
Sequence
(BLAST)
(BLAST)
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.