Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- plastid 1
- cytosol 2
- mitochondrion 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX98212 | Canola | mitochondrion | 70.39 | 65.64 |
| Bra023821.1-P | Field mustard | cytosol | 65.13 | 61.11 |
| CDY34247 | Canola | cytosol | 65.13 | 61.11 |
| Bra039959.1-P | Field mustard | extracellular | 74.34 | 58.85 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 75.0 | 58.16 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 73.03 | 56.06 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 67.76 | 52.55 |
| KRH77848 | Soybean | mitochondrion | 44.74 | 49.28 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 61.84 | 48.45 |
| PGSC0003DMT400075166 | Potato | cytosol | 42.76 | 47.79 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 60.53 | 47.42 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 50.0 | 47.2 |
| Solyc09g061350.1.1 | Tomato | cytosol | 33.55 | 46.79 |
| PGSC0003DMT400034952 | Potato | cytosol | 45.39 | 46.62 |
| PGSC0003DMT400042036 | Potato | cytosol | 50.0 | 45.24 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 51.32 | 44.57 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 49.34 | 44.12 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 48.68 | 43.53 |
| Solyc09g082150.1.1 | Tomato | cytosol | 30.92 | 43.12 |
| Solyc09g061510.1.1 | Tomato | cytosol | 26.32 | 43.01 |
| Zm00001d018908_P001 | Maize | mitochondrion | 47.37 | 42.6 |
| Zm00001d007836_P001 | Maize | mitochondrion | 46.71 | 41.76 |
| Os07t0173100-00 | Rice | mitochondrion | 46.05 | 40.94 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 40.79 | 40.79 |
| EER95920 | Sorghum | mitochondrion | 47.37 | 40.68 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 50.0 | 40.43 |
| EER92826 | Sorghum | cytosol | 44.08 | 39.65 |
| Zm00001d027742_P001 | Maize | cytosol | 42.11 | 39.51 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 39.47 | 39.47 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 39.47 | 39.47 |
| Os03t0159900-01 | Rice | cytosol | 41.45 | 38.89 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 38.16 | 36.94 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 57.24 | 36.1 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 48.68 | 36.1 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 36.18 | 31.79 |
| HORVU4Hr1G073230.1 | Barley | plastid | 41.45 | 23.33 |
Protein Annotations
| MapMan:35.2 | EntrezGene:827140 | UniProt:A0A178V4A0 | ProteinID:AEE83507.1 | ArrayExpress:AT4G14830 | EnsemblPlantsGene:AT4G14830 |
| RefSeq:AT4G14830 | TAIR:AT4G14830 | RefSeq:AT4G14830-TAIR-G | EnsemblPlants:AT4G14830.1 | TAIR:AT4G14830.1 | EMBL:BT012599 |
| EMBL:BT014827 | ProteinID:CAB10262.1 | ProteinID:CAB78525.1 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| GO:GO:0008150 | Symbol:HSP1 | RefSeq:NP_193219.1 | UniProt:O23338 | ProteinID:OAP01029.1 | PO:PO:0000293 |
| PANTHER:PTHR33879 | PANTHER:PTHR33879:SF3 | UniParc:UPI00000A8795 | SEG:seg | : | : |
Description
HSP1HSP1 [Source:UniProtKB/TrEMBL;Acc:A0A178V4A0]
Coordinates
chr4:+:8510678..8511928
Molecular Weight (calculated)
16936.3 Da
IEP (calculated)
5.589
GRAVY (calculated)
-0.361
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MKIHPLPRNE NNNNLIHHAR DPTREPGKKL RRLPHIFSRV LELPLKSDAD VAVEESHDCF RFVAETDGGG GGGVRAYMVE IHPGVTKILV RTNGSSSLGL
101: SLDELELDVW RFRLPESTRP ELVTVDCDGD GELIVTVPKI EDNGRDLIVL VQ
101: SLDELELDVW RFRLPESTRP ELVTVDCDGD GELIVTVPKI EDNGRDLIVL VQ
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.