Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 1
- plastid 3
- cytosol 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| Os11t0171500-01 | |
| Os12t0169800-00 |
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EER92826 | Sorghum | cytosol | 74.07 | 71.01 |
| Zm00001d027742_P001 | Maize | cytosol | 70.99 | 70.99 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 54.32 | 57.89 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 53.7 | 57.24 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 51.85 | 55.26 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 45.06 | 45.34 |
| KRH77848 | Soybean | mitochondrion | 36.42 | 42.75 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 45.06 | 41.71 |
| AT4G14830.1 | Thale cress | cytosol | 38.89 | 41.45 |
| Solyc09g082150.1.1 | Tomato | cytosol | 27.78 | 41.28 |
| PGSC0003DMT400075166 | Potato | cytosol | 34.57 | 41.18 |
| PGSC0003DMT400051869 | Potato | plastid | 36.42 | 40.14 |
| PGSC0003DMT400042036 | Potato | cytosol | 41.36 | 39.88 |
| Os07t0173100-00 | Rice | mitochondrion | 41.36 | 39.18 |
| CDY34247 | Canola | cytosol | 38.89 | 38.89 |
| Bra023821.1-P | Field mustard | cytosol | 38.89 | 38.89 |
| KRH35512 | Soybean | endoplasmic reticulum, extracellular | 46.3 | 38.66 |
| KRG91317 | Soybean | endoplasmic reticulum, extracellular | 46.3 | 38.66 |
| Solyc06g084220.1.1 | Tomato | plastid | 34.57 | 38.62 |
| CDX98212 | Canola | mitochondrion | 38.27 | 38.04 |
| VIT_07s0151g00830.t01 | Wine grape | cytosol | 38.89 | 37.95 |
| PGSC0003DMT400034952 | Potato | cytosol | 34.57 | 37.84 |
| PGSC0003DMT400049751 | Potato | mitochondrion | 37.65 | 37.65 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 37.65 | 37.65 |
| PGSC0003DMT400082124 | Potato | cytosol, mitochondrion | 43.21 | 37.23 |
| KRH71407 | Soybean | mitochondrion | 30.86 | 35.97 |
| Bra039959.1-P | Field mustard | extracellular | 40.74 | 34.38 |
| CDY10651 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 41.36 | 34.18 |
| Solyc09g061350.1.1 | Tomato | cytosol | 22.84 | 33.95 |
| HORVU4Hr1G073230.1 | Barley | plastid | 56.17 | 33.7 |
| AT3G22530.1 | Thale cress | endoplasmic reticulum, extracellular | 40.74 | 33.33 |
| KRH32032 | Soybean | mitochondrion | 25.93 | 32.81 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 41.36 | 32.68 |
| CDY10290 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 38.89 | 32.14 |
| Solyc09g061510.1.1 | Tomato | cytosol | 17.9 | 31.18 |
| VIT_05s0020g03610.t01 | Wine grape | cytosol | 41.98 | 28.22 |
| KRH55262 | Soybean | cytosol, plasma membrane, plastid | 25.93 | 24.28 |
Protein Annotations
| EMBL:AK099400 | EnsemblPlants:Os03t0159900-01 | EnsemblPlantsGene:Os03g0159900 | EntrezGene:4331694 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF1 |
| PFscan:PS51257 | ProteinID:ABF94093.1 | ProteinID:BAS82404.1 | ProteinID:EEE58358.1 | RefSeq:XP_015631666.1 | SEG:seg |
| UniParc:UPI0000DB4C3D | UniProt:Q10RG6 | MapMan:35.2 | : | : | : |
Description
Hypothetical conserved gene. (Os03t0159900-01);Hypothetical conserved gene. (Os03t0159900-02)
Coordinates
chr3:-:3195766..3196656
Molecular Weight (calculated)
16928.1 Da
IEP (calculated)
6.345
GRAVY (calculated)
-0.167
Length
162 amino acids
Sequence
(BLAST)
(BLAST)
001: MRIHPSPATT AGGSCGGKKD LRRLPHVYSK VLELPFPADT DVAVFEGPDA FHFVVSAAAA LAGEVRVRTV RIHPGVVRVV VQAGGGGVHD DGDDDDMELD
101: KWRSRLPEAS CPAMAVAGYV NGQLVVTVPK GRGGGEGDND GGEEAWRCCN GGKISGRLVV VQ
101: KWRSRLPEAS CPAMAVAGYV NGQLVVTVPK GRGGGEGDND GGEEAWRCCN GGKISGRLVV VQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.