Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 2
- plastid 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400051869 | Potato | plastid | 83.45 | 82.31 |
| Solyc09g065370.1.1 | Tomato | mitochondrion | 66.21 | 59.26 |
| VIT_07s0151g00830.t01 | Wine grape | cytosol | 56.55 | 49.4 |
| GSMUA_Achr9P25740_001 | Banana | mitochondrion | 49.66 | 44.72 |
| Zm00001d018908_P001 | Maize | mitochondrion | 47.59 | 40.83 |
| Os07t0173100-00 | Rice | mitochondrion | 47.59 | 40.35 |
| KRH71407 | Soybean | mitochondrion | 37.93 | 39.57 |
| TraesCS4B01G276100.1 | Wheat | cytosol | 41.38 | 39.47 |
| Solyc09g061350.1.1 | Tomato | cytosol | 29.66 | 39.45 |
| Zm00001d007836_P001 | Maize | mitochondrion | 46.21 | 39.41 |
| TraesCS2B01G259800.1 | Wheat | mitochondrion | 46.21 | 39.41 |
| EER95920 | Sorghum | mitochondrion | 47.59 | 38.98 |
| GSMUA_Achr9P10550_001 | Banana | mitochondrion | 46.9 | 38.86 |
| TraesCS4A01G030000.1 | Wheat | cytosol | 40.69 | 38.82 |
| TraesCS4D01G274600.1 | Wheat | cytosol | 40.69 | 38.82 |
| Solyc09g082150.1.1 | Tomato | cytosol | 28.97 | 38.53 |
| TraesCS2D01G246400.1 | Wheat | mitochondrion | 44.83 | 38.24 |
| Zm00001d027742_P001 | Maize | cytosol | 41.38 | 37.04 |
| OQU90686 | Sorghum | cytosol, mitochondrion | 39.31 | 36.31 |
| EER92826 | Sorghum | cytosol | 42.07 | 36.09 |
| Solyc06g054150.1.1 | Tomato | extracellular, golgi, mitochondrion, plastid | 48.97 | 34.63 |
| Os03t0159900-01 | Rice | cytosol | 38.62 | 34.57 |
| KRH32032 | Soybean | mitochondrion | 30.34 | 34.38 |
| Solyc09g061510.1.1 | Tomato | cytosol | 21.38 | 33.33 |
| HORVU4Hr1G073230.1 | Barley | plastid | 40.69 | 21.85 |
Protein Annotations
| EnsemblPlants:Solyc06g084220.1.1 | EnsemblPlantsGene:Solyc06g084220.1 | PANTHER:PTHR33879 | PANTHER:PTHR33879:SF4 | UniParc:UPI0001FBD961 | UniProt:K4CAS7 |
| MapMan:35.2 | : | : | : | : | : |
Description
No Description!
Coordinates
chr6:+:49409808..49410245
Molecular Weight (calculated)
16045.2 Da
IEP (calculated)
5.586
GRAVY (calculated)
-0.065
Length
145 amino acids
Sequence
(BLAST)
(BLAST)
001: MKVHPVTSNV LSPANGSVCR KKKLRRLPHI FAKVLELPFH SDSDVSIHET SDSLRFVIPT DDVGDNIRAH IVEIYPGVTK IVIRADNVFD SSLDLDLWRF
101: RLPATTLPEL ASARFSDGEL VVTVPKGEEE DDGDIVRAGG FVLVQ
101: RLPATTLPEL ASARFSDGEL VVTVPKGEEE DDGDIVRAGG FVLVQ
001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ
Arabidopsis Description
Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.