Factsheet for Bra023821.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra034407.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT3G22530.1	Bra034407.1-P	AT1G35670.1	19130088
AT4G14830.1	Bra034407.1-P	AT1G35670.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY34247	Canola	cytosol	99.38	99.38
AT4G14830.1	Thale cress	cytosol	61.11	65.13
AT3G22530.1	Thale cress	endoplasmic reticulum, extracellular	78.4	64.14
Bra039959.1-P	Field mustard	extracellular	75.93	64.06
KRG91317	Soybean	endoplasmic reticulum, extracellular	56.79	47.42
KRH35512	Soybean	endoplasmic reticulum, extracellular	56.17	46.91
GSMUA_Achr9P25740_001	Banana	mitochondrion	46.3	46.58
PGSC0003DMT400034952	Potato	cytosol	41.98	45.95
KRH77848	Soybean	mitochondrion	38.89	45.65
Solyc09g061350.1.1	Tomato	cytosol	30.25	44.95
GSMUA_Achr9P10550_001	Banana	mitochondrion	47.53	44.0
Solyc09g082150.1.1	Tomato	cytosol	29.01	43.12
PGSC0003DMT400075166	Potato	cytosol	35.8	42.65
PGSC0003DMT400082124	Potato	cytosol, mitochondrion	49.38	42.55
Zm00001d018908_P001	Maize	mitochondrion	43.83	42.01
TraesCS2B01G259800.1	Wheat	mitochondrion	43.21	41.18
Os07t0173100-00	Rice	mitochondrion	43.21	40.94
Solyc09g061510.1.1	Tomato	cytosol	23.46	40.86
TraesCS2D01G246400.1	Wheat	mitochondrion	42.59	40.59
PGSC0003DMT400042036	Potato	cytosol	41.98	40.48
EER92826	Sorghum	cytosol	41.98	40.24
Zm00001d027742_P001	Maize	cytosol	40.12	40.12
EER95920	Sorghum	mitochondrion	43.83	40.11
Zm00001d007836_P001	Maize	mitochondrion	41.98	40.0
TraesCS4B01G276100.1	Wheat	cytosol	37.04	39.47
Os03t0159900-01	Rice	cytosol	38.89	38.89
TraesCS4A01G030000.1	Wheat	cytosol	36.42	38.82
TraesCS4D01G274600.1	Wheat	cytosol	36.42	38.82
OQU90686	Sorghum	cytosol, mitochondrion	37.04	38.22
VIT_05s0020g03610.t01	Wine grape	cytosol	53.09	35.68
Solyc06g054150.1.1	Tomato	extracellular, golgi, mitochondrion, plastid	42.59	33.66
KRH55262	Soybean	cytosol, plasma membrane, plastid	31.48	29.48
HORVU4Hr1G073230.1	Barley	plastid	37.65	22.59

Protein Annotations

EnsemblPlants:Bra023821.1	EnsemblPlants:Bra023821.1-P	EnsemblPlantsGene:Bra023821	PANTHER:PTHR33879	PANTHER:PTHR33879:SF3	SEG:seg
UniParc:UPI000254417E	UniProt:M4E4W7	MapMan:35.2	:	:	:

Description

AT3G22530 (E=1e-045) | unknown protein

Coordinates

chrA01:+:20201026..20201514

Molecular Weight (calculated)

17967.6 Da

IEP (calculated)

6.018

GRAVY (calculated)

-0.179

Length

162 amino acids

Sequence
(BLAST)

001: MRVHPILNNN TLIHHHHHHN PTREPGKNLR RLPHIFNRVL ELPLRSEADV SVEENPDCFR FVAETDGVRG GGGEMTAYMV EIHPGITKIV VRTNGLSLGL
101: SLDELELDVW RFRLPETTRP ELVTVACVDG ALVVTVPKMV SEEDDDGGFG QGVGSGRLLL VL

Best Arabidopsis Sequence Match ( AT3G22530.1 )
(BLAST)

001: MILIPVKIQS LFSYLLLLNL IQSIDKPNPE AMRVHPIPRN INNTLIHHHH HNPTREPGKN LRRLPHIFNR VLELPLRSEA DVAVEERHDC FRFVAETVGL
101: CNGDGEMRAY MVEIHPGITK IVVRTNGSSS LGLSLDELEL DVWRFRLPES TRPELVTVAC VDGDLIVTVP KNAEEEDDDG GGGDFGQGIG SGRLVLVQ

Arabidopsis Description

Heat shock protein [Source:UniProtKB/TrEMBL;Acc:Q8VY73]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.