Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 4
- endoplasmic reticulum 1
- cytosol 1
- mitochondrion 1
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT5G52550.1 | KRG91803 | AT1G35670.1 | 19130088 |
| AT5G52550.1 | KRH34983 | AT1G35670.1 | 19130088 |
| AT5G52550.1 | KRH34984 | AT1G35670.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH08864 | Soybean | extracellular, mitochondrion, plastid | 86.43 | 67.19 |
| KRH35243 | Soybean | nucleus | 68.34 | 55.97 |
| KRG91581 | Soybean | nucleus | 65.83 | 54.36 |
| Solyc06g036250.1.1 | Tomato | nucleus | 55.28 | 52.63 |
| PGSC0003DMT400074347 | Potato | nucleus | 55.28 | 52.63 |
| PGSC0003DMT400026357 | Potato | nucleus | 52.76 | 52.5 |
| Bra019146.1-P | Field mustard | nucleus | 47.74 | 52.49 |
| CDY01170 | Canola | nucleus | 47.24 | 52.22 |
| AT4G25670.1 | Thale cress | nucleus | 48.74 | 51.6 |
| AT4G25690.1 | Thale cress | nucleus | 48.24 | 50.26 |
| Solyc03g008000.1.1 | Tomato | nucleus | 53.27 | 49.77 |
| CDX94428 | Canola | nucleus | 46.73 | 49.47 |
| CDX89403 | Canola | nucleus | 46.73 | 48.95 |
| Bra013909.1-P | Field mustard | nucleus | 46.73 | 48.95 |
| CDX94425 | Canola | nucleus | 45.73 | 47.4 |
| CDX89401 | Canola | nucleus | 45.23 | 46.63 |
| Bra013911.1-P | Field mustard | nucleus | 44.72 | 46.11 |
| VIT_16s0050g01060.t01 | Wine grape | golgi | 60.8 | 44.81 |
| CDY61350 | Canola | nucleus | 44.72 | 42.18 |
| GSMUA_Achr2P04280_001 | Banana | nucleus | 43.22 | 40.57 |
| Os02t0104200-01 | Rice | nucleus | 44.22 | 39.46 |
| TraesCS6D01G014400.1 | Wheat | nucleus | 43.72 | 39.19 |
| TraesCS6A01G011600.1 | Wheat | nucleus | 43.72 | 39.19 |
| Zm00001d014937_P001 | Maize | nucleus | 45.23 | 38.96 |
| HORVU6Hr1G002230.1 | Barley | nucleus | 43.22 | 38.74 |
| Os06t0106900-01 | Rice | nucleus | 41.21 | 38.14 |
| TraesCS6B01G017800.1 | Wheat | nucleus | 42.71 | 37.95 |
| CDX91661 | Canola | nucleus | 46.73 | 37.5 |
| Bra022600.1-P | Field mustard | nucleus | 45.73 | 36.69 |
| CDY27057 | Canola | nucleus | 45.73 | 36.69 |
| TraesCS7D01G016200.1 | Wheat | nucleus | 40.7 | 34.76 |
| TraesCSU01G065700.1 | Wheat | nucleus | 40.2 | 34.19 |
| GSMUA_Achr1P06450_001 | Banana | cytosol, golgi, nucleus | 47.24 | 34.18 |
| HORVU7Hr1G002090.1 | Barley | nucleus | 40.2 | 34.04 |
| TraesCS7A01G019200.1 | Wheat | nucleus | 39.2 | 33.33 |
| TraesCS6D01G014300.1 | Wheat | nucleus | 29.65 | 32.6 |
| TraesCS6A01G011500.1 | Wheat | nucleus | 25.13 | 27.62 |
| AT5G52550.1 | Thale cress | nucleus | 44.72 | 24.72 |
| OQU84149 | Sorghum | nucleus | 44.22 | 18.49 |
| Os02t0104100-00 | Rice | nucleus | 13.07 | 9.63 |
Protein Annotations
| EMBL:ACUP02005804 | EnsemblPlants:KRH38385 | EnsemblPlantsGene:GLYMA_09G132500 | EntrezGene:102665232 | ncoils:Coil | PANTHER:PTHR34212 |
| PANTHER:PTHR34212:SF1 | ProteinID:KRH38385 | ProteinID:KRH38385.1 | SEG:seg | UniParc:UPI00023385F8 | UniProt:K7LDM8 |
| MapMan:35.2 | : | : | : | : | : |
Description
hypothetical protein
Coordinates
chr9:+:33025111..33028065
Molecular Weight (calculated)
21863.6 Da
IEP (calculated)
4.745
GRAVY (calculated)
-0.607
Length
199 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTMACNKGQ NVRKAKKKQV KDELDRLKQA EKKKRRLEKA LATSAAIISE LEKKKQIKKE EQQRLDEEGA AIAEAVALHV LLGEDSDESC KVVIDNGNQN
101: IGISVSGESA CFPHLEGGGG WSFERVGWVS DAYRYGCERG AAENGEWSFS TEPFEKNMHE PLYEGAGWGP AGFSADLIAA QAVSSLQIAE EADEDRILF
101: IGISVSGESA CFPHLEGGGG WSFERVGWVS DAYRYGCERG AAENGEWSFS TEPFEKNMHE PLYEGAGWGP AGFSADLIAA QAVSSLQIAE EADEDRILF
001: MDHTVCKQVQ PVVRKAKKKH GKDEFDRIKQ AEKKKRRLEK ALATSAAIRA ELEKKKQKRL EEQQRLDEEG AAIAEAVALH VLLGEDSDDS SRVKFGEEKG
101: FTMDLFRDER TNYVPRQSCA SYAVQGIGFV SNGYGLGDSN WSPFTRRGAW DNNMGISADL IAAQAVSALQ ISENADGNAF VFNGMFRG
101: FTMDLFRDER TNYVPRQSCA SYAVQGIGFV SNGYGLGDSN WSPFTRRGAW DNNMGISADL IAAQAVSALQ ISENADGNAF VFNGMFRG
Arabidopsis Description
AT4g25670/L73G19_50 [Source:UniProtKB/TrEMBL;Acc:Q94BX3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.