Subcellular Localization
min:
: max
Winner_takes_all: nucleus
Predictor Summary:
Predictor Summary:
- nucleus 5
- cytosol 1
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY01170 | Canola | nucleus | 92.82 | 93.33 |
| AT4G25670.1 | Thale cress | nucleus | 78.45 | 75.53 |
| Bra013909.1-P | Field mustard | nucleus | 79.01 | 75.26 |
| AT4G25690.1 | Thale cress | nucleus | 76.24 | 72.25 |
| Bra013911.1-P | Field mustard | nucleus | 73.48 | 68.91 |
| KRH38385 | Soybean | nucleus | 52.49 | 47.74 |
| PGSC0003DMT400026357 | Potato | nucleus | 51.38 | 46.5 |
| Solyc06g036250.1.1 | Tomato | nucleus | 53.59 | 46.41 |
| PGSC0003DMT400074347 | Potato | nucleus | 53.59 | 46.41 |
| Solyc03g008000.1.1 | Tomato | nucleus | 52.49 | 44.6 |
| Bra022600.1-P | Field mustard | nucleus | 55.25 | 40.32 |
| GSMUA_Achr2P04280_001 | Banana | nucleus | 46.41 | 39.62 |
| Os02t0104200-01 | Rice | nucleus | 48.62 | 39.46 |
| KRG91581 | Soybean | nucleus | 51.93 | 39.0 |
| VIT_16s0050g01060.t01 | Wine grape | golgi | 58.01 | 38.89 |
| TraesCS6D01G014400.1 | Wheat | nucleus | 47.51 | 38.74 |
| HORVU6Hr1G002230.1 | Barley | nucleus | 47.51 | 38.74 |
| TraesCS6A01G011600.1 | Wheat | nucleus | 47.51 | 38.74 |
| KRH35243 | Soybean | nucleus | 51.93 | 38.68 |
| KRH08864 | Soybean | extracellular, mitochondrion, plastid | 54.14 | 38.28 |
| Zm00001d014937_P001 | Maize | nucleus | 48.62 | 38.1 |
| TraesCS6B01G017800.1 | Wheat | nucleus | 46.96 | 37.95 |
| Os06t0106900-01 | Rice | nucleus | 41.99 | 35.35 |
| TraesCSU01G065700.1 | Wheat | nucleus | 43.65 | 33.76 |
| TraesCS7D01G016200.1 | Wheat | nucleus | 43.09 | 33.48 |
| HORVU7Hr1G002090.1 | Barley | nucleus | 43.09 | 33.19 |
| GSMUA_Achr1P06450_001 | Banana | cytosol, golgi, nucleus | 49.17 | 32.36 |
| TraesCS7A01G019200.1 | Wheat | nucleus | 40.88 | 31.62 |
| TraesCS6D01G014300.1 | Wheat | nucleus | 29.83 | 29.83 |
| TraesCS6A01G011500.1 | Wheat | nucleus | 26.52 | 26.52 |
| OQU84149 | Sorghum | nucleus | 47.51 | 18.07 |
| Os02t0104100-00 | Rice | nucleus | 13.81 | 9.26 |
Protein Annotations
Description
AT4G25670 (E=8e-025) | unknown protein
Coordinates
chrA03:-:26068421..26068966
Molecular Weight (calculated)
19843.4 Da
IEP (calculated)
5.739
GRAVY (calculated)
-0.598
Length
181 amino acids
Sequence
(BLAST)
(BLAST)
001: MDHVVCKQFQ PVARKVKKKK KAHGKDESDR VKQAEKKKRR LEKALATSAA IRAELEKKKQ KKLEEQQRLD EEGAAVAEAV ALHVLLGEDS DDDDSSPVML
101: GEEKGFKMDM FRGESYAVQG IGFVSNGCGL GDSNWSPFAG DVWDDSMGIS ADLIAAQAVS SLHISENSDE NAFVLNGMFR G
101: GEEKGFKMDM FRGESYAVQG IGFVSNGCGL GDSNWSPFAG DVWDDSMGIS ADLIAAQAVS SLHISENSDE NAFVLNGMFR G
001: MDHTVCKQVQ PVVRKAKKKH GKDEFDRIKQ AEKKKRRLEK ALATSAAIRA ELEKKKQKRL EEQQRLDEEG AAIAEAVALH VLLGEDSDDS SRVKFGEEKG
101: FTMDLFRDER TNYVPRQSCA SYAVQGIGFV SNGYGLGDSN WSPFTRRGAW DNNMGISADL IAAQAVSALQ ISENADGNAF VFNGMFRG
101: FTMDLFRDER TNYVPRQSCA SYAVQGIGFV SNGYGLGDSN WSPFTRRGAW DNNMGISADL IAAQAVSALQ ISENADGNAF VFNGMFRG
Arabidopsis Description
AT4g25670/L73G19_50 [Source:UniProtKB/TrEMBL;Acc:Q94BX3]
SUBAcon: [nucleus]
SUBAcon: [nucleus]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.