Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRG89296 | Soybean | plasma membrane | 95.19 | 95.05 |
| KRH38202 | Soybean | plasma membrane | 79.85 | 83.75 |
| CDY25767 | Canola | plasma membrane | 70.23 | 81.5 |
| KRH49577 | Soybean | plasma membrane | 68.12 | 81.47 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 79.25 | 81.2 |
| CDY12491 | Canola | plasma membrane | 69.92 | 81.01 |
| CDX96288 | Canola | golgi, plasma membrane | 70.83 | 80.79 |
| CDY68262 | Canola | plasma membrane | 70.83 | 80.65 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 73.08 | 80.6 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 78.8 | 80.12 |
| Solyc05g008060.2.1 | Tomato | nucleus | 78.35 | 79.79 |
| CDY23471 | Canola | golgi, plasma membrane | 58.8 | 79.31 |
| CDY63826 | Canola | plasma membrane | 67.07 | 79.22 |
| CDY40380 | Canola | plasma membrane | 66.77 | 79.0 |
| AT1G23080.1 | Thale cress | plasma membrane | 73.53 | 79.0 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 72.63 | 78.79 |
| CDX68327 | Canola | plasma membrane | 57.44 | 78.76 |
| AT1G70940.1 | Thale cress | plasma membrane | 75.49 | 78.44 |
| CDX91695 | Canola | plasma membrane | 65.86 | 76.71 |
| PGSC0003DMT400015267 | Potato | cytosol | 53.08 | 76.08 |
| AT2G01420.2 | Thale cress | plasma membrane | 70.38 | 75.97 |
| CDY41467 | Canola | plasma membrane | 66.62 | 75.86 |
| Bra016366.1-P | Field mustard | golgi, plasma membrane | 66.32 | 75.51 |
| Bra003938.1-P | Field mustard | golgi, plasma membrane | 61.2 | 74.54 |
| Bra016173.1-P | Field mustard | plasma membrane | 67.22 | 70.73 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 51.13 | 70.25 |
| KRH18110 | Soybean | extracellular | 13.23 | 69.84 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 60.75 | 69.42 |
| KRH41847 | Soybean | golgi, plasma membrane | 62.41 | 68.82 |
| CDY09501 | Canola | plasma membrane | 58.2 | 68.62 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 63.76 | 68.61 |
| KRH66749 | Soybean | plasma membrane | 61.5 | 68.51 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 62.26 | 68.2 |
| KRH48642 | Soybean | plasma membrane | 61.65 | 67.77 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 60.0 | 67.63 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 59.7 | 66.72 |
| KRG95082 | Soybean | plasma membrane | 47.52 | 65.7 |
| Zm00001d044083_P001 | Maize | plasma membrane | 59.55 | 64.92 |
| KRH39071 | Soybean | plasma membrane | 40.15 | 63.57 |
| EES01159 | Sorghum | golgi, plasma membrane | 60.15 | 61.26 |
| KRH02749 | Soybean | plasma membrane | 58.35 | 60.91 |
| KRH19119 | Soybean | endoplasmic reticulum | 58.05 | 60.12 |
| Os05t0576900-01 | Rice | golgi, plasma membrane, vacuole | 52.03 | 58.54 |
| Zm00001d045219_P001 | Maize | plasma membrane | 51.13 | 58.52 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 53.53 | 58.46 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 51.88 | 57.5 |
| KRH37366 | Soybean | plasma membrane | 38.2 | 57.34 |
| TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 51.13 | 57.05 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 50.98 | 56.78 |
| Bra026669.1-P | Field mustard | golgi, plasma membrane | 67.67 | 56.46 |
| KRH15941 | Soybean | plasma membrane | 44.81 | 56.12 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 50.38 | 55.93 |
| KRH01128 | Soybean | plasma membrane | 28.87 | 53.48 |
| KRH12968 | Soybean | plasma membrane | 39.55 | 53.46 |
| KRH40132 | Soybean | plasma membrane | 28.72 | 53.35 |
| KRH18109 | Soybean | plasma membrane | 27.07 | 51.43 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 27.97 | 51.38 |
| KRH37897 | Soybean | plasma membrane | 37.59 | 51.33 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 27.82 | 50.96 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 24.51 | 44.17 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 30.68 | 43.5 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 24.21 | 42.71 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 22.86 | 21.87 |
Protein Annotations
| EntrezGene:100785146 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02004685 | InterPro:Auxin_eff_plant | EnsemblPlantsGene:GLYMA_07G217900 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 |
| GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:K7L348 | EnsemblPlants:KRH50369 |
| ProteinID:KRH50369 | ProteinID:KRH50369.1 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF36 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000233838B | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr7:-:39051020..39055816
Molecular Weight (calculated)
72120.4 Da
IEP (calculated)
8.018
GRAVY (calculated)
0.159
Length
665 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWGDFYTV MSAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS MNNPYEMNFR FIAADTLQKI IMLFALAIWT NFSANGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG KLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETAA SIVSFKIDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FYSMMGYAPR HSNFGAADMY SVQSTSRGVT PRPSNFEENC GSAGAMQQQT
301: ISSPRFGFYP AVQTLPAAYP APNPEFSSGL TKSVSKNSQT QPQLQTQTQP QVQAQVAPPA PPPQVAQPAN SGNKTSHDAK ELHMFVWSSS ASPVSEAGGL
401: HVFSGADFGA SDQSGRSDQG AKEIRMLVAD DHPQNGETNK AAAEGEFGGE ELKFPAKEGE QAEEEGGKAG PAGLNKLGSS STAELHPKAA VAGAGKHMPP
501: ASVMTRLILI MVWRKLIRNP NTYSSLIGVI WSLVAFRWHV HMPKIIEKSI SILSDAGLGM AMFSLGLFMA LQPKIIACGN SVATFAMAVR FLTGPAVMAA
601: ASIAVGLRGT LLRIAIVQAA LPQGIVPFVF AKEYNVHPAI LSTAVIFGML IALPITLLYY ILLGL
101: MITIFSLSTL PNTLVMGIPL LIAMYGEYSG KLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETAA SIVSFKIDSD VVSLDGRDFL ETDAEVGDDG
201: KLHVTVRKSN ASRRSFMMTP RPSNLTGAEI YSLSSSRNPT PRGSNFNHAD FYSMMGYAPR HSNFGAADMY SVQSTSRGVT PRPSNFEENC GSAGAMQQQT
301: ISSPRFGFYP AVQTLPAAYP APNPEFSSGL TKSVSKNSQT QPQLQTQTQP QVQAQVAPPA PPPQVAQPAN SGNKTSHDAK ELHMFVWSSS ASPVSEAGGL
401: HVFSGADFGA SDQSGRSDQG AKEIRMLVAD DHPQNGETNK AAAEGEFGGE ELKFPAKEGE QAEEEGGKAG PAGLNKLGSS STAELHPKAA VAGAGKHMPP
501: ASVMTRLILI MVWRKLIRNP NTYSSLIGVI WSLVAFRWHV HMPKIIEKSI SILSDAGLGM AMFSLGLFMA LQPKIIACGN SVATFAMAVR FLTGPAVMAA
601: ASIAVGLRGT LLRIAIVQAA LPQGIVPFVF AKEYNVHPAI LSTAVIFGML IALPITLLYY ILLGL
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
Arabidopsis Description
PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.