Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 93.5 | 91.51 |
| VIT_04s0023g00320.t01 | Wine grape | plasma membrane | 68.29 | 70.79 |
| Bra008615.1-P | Field mustard | golgi, plasma membrane, vacuole | 65.04 | 68.97 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 65.04 | 68.97 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 64.77 | 68.68 |
| AT5G16530.1 | Thale cress | plasma membrane | 65.04 | 68.38 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 63.96 | 67.82 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane, vacuole | 59.08 | 67.08 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 57.72 | 66.36 |
| CDX78697 | Canola | plasma membrane | 64.23 | 60.15 |
| Os01t0919800-01 | Rice | plasma membrane | 57.18 | 58.13 |
| TraesCS3B01G462900.1 | Wheat | plasma membrane | 56.91 | 57.07 |
| KXG33996 | Sorghum | plasma membrane | 57.45 | 56.38 |
| TraesCS3A01G426700.1 | Wheat | plasma membrane | 56.91 | 55.7 |
| TraesCS3D01G421600.1 | Wheat | plasma membrane | 56.91 | 55.56 |
| HORVU3Hr1G094000.3 | Barley | plasma membrane | 57.45 | 55.35 |
| Zm00001d042345_P001 | Maize | plasma membrane | 57.18 | 55.24 |
| KRH18110 | Soybean | extracellular | 18.43 | 53.97 |
| Os11t0122800-00 | Rice | plasma membrane | 34.96 | 43.58 |
| KRH01128 | Soybean | plasma membrane | 37.67 | 38.72 |
| KRH40132 | Soybean | plasma membrane | 36.86 | 37.99 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 36.59 | 37.29 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 36.04 | 36.64 |
| KRH37366 | Soybean | plasma membrane | 40.38 | 33.63 |
| KRH12968 | Soybean | plasma membrane | 43.09 | 32.32 |
| KRH37897 | Soybean | plasma membrane | 40.92 | 31.01 |
| KRH15941 | Soybean | plasma membrane | 42.82 | 29.76 |
| KRH41847 | Soybean | golgi, plasma membrane | 44.72 | 27.36 |
| KRH48642 | Soybean | plasma membrane | 44.44 | 27.11 |
| KRH49577 | Soybean | plasma membrane | 40.65 | 26.98 |
| KRH66749 | Soybean | plasma membrane | 43.36 | 26.8 |
| KRH38202 | Soybean | plasma membrane | 44.99 | 26.18 |
| KRH02749 | Soybean | plasma membrane | 43.9 | 25.43 |
| KRH19119 | Soybean | endoplasmic reticulum | 43.63 | 25.08 |
| KRG89296 | Soybean | plasma membrane | 44.44 | 24.62 |
| KRH50369 | Soybean | plasma membrane | 44.17 | 24.51 |
| KRH12361 | Soybean | endoplasmic reticulum, golgi | 29.27 | 23.03 |
| KRH18109 | Soybean | plasma membrane | 21.41 | 22.57 |
| KRG95082 | Soybean | plasma membrane | 28.18 | 21.62 |
| KRH39071 | Soybean | plasma membrane | 22.49 | 19.76 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EMBL:ACUP02011481 | InterPro:Auxin_eff_plant | EnsemblPlantsGene:GLYMA_18G241000 | GO:GO:0003674 |
| GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:I1N3Y1 | EnsemblPlants:KRH00905 | ProteinID:KRH00905 |
| ProteinID:KRH00905.1 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF2 | TIGRFAMs:TIGR00946 |
| TMHMM:TMhelix | UniParc:UPI000233E588 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr18:+:52959427..52963551
Molecular Weight (calculated)
40657.9 Da
IEP (calculated)
8.127
GRAVY (calculated)
0.707
Length
369 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGWEDVYKV VVAVVPLYFA LLLGYGSLKW WNIFTKEQCE AINKLVCYFT LPLFIFEFTA HIDPFKMNFS FIAADTISKF IIMVVLALWA KCTPKCTFCW
101: SIISFSLCNL TNAVVVGVPM VKPMYGALGV DLVVQSSVLQ ATIWLPLLLF VMEFWRTGIE GTTTTTVKPR SKTMINKNEG GGGKDVEAVD VKEELMLEES
201: VTSRLPFCKV MKLVWRKLAT NPNSYGCVIG ISWAFISNRW NLEMPSMLEG SIQIMSKAGT GTAMFSMGIF MALQEKLIAC GPSMTLIGLV LKFIAGPAAT
301: AIGAIAVGLR GDVLRVVIIQ AAVPQSITSF IFAKEYGLHP EVLSTAVIFG MIVSLPVLVA YYAILEFVH
101: SIISFSLCNL TNAVVVGVPM VKPMYGALGV DLVVQSSVLQ ATIWLPLLLF VMEFWRTGIE GTTTTTVKPR SKTMINKNEG GGGKDVEAVD VKEELMLEES
201: VTSRLPFCKV MKLVWRKLAT NPNSYGCVIG ISWAFISNRW NLEMPSMLEG SIQIMSKAGT GTAMFSMGIF MALQEKLIAC GPSMTLIGLV LKFIAGPAAT
301: AIGAIAVGLR GDVLRVVIIQ AAVPQSITSF IFAKEYGLHP EVLSTAVIFG MIVSLPVLVA YYAILEFVH
001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
Arabidopsis Description
PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.