Factsheet for Os01t0919800-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 7
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG33996	Sorghum	plasma membrane	90.63	87.5
Zm00001d042345_P001	Maize	plasma membrane	90.36	85.86
TraesCS3B01G462900.1	Wheat	plasma membrane	85.95	84.78
TraesCS3A01G426700.1	Wheat	plasma membrane	85.67	82.49
TraesCS3D01G421600.1	Wheat	plasma membrane	85.67	82.28
HORVU3Hr1G094000.3	Barley	plasma membrane	86.5	81.98
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	61.71	69.78
GSMUA_Achr11P...	Banana	golgi, plasma membrane, vacuole	61.43	68.62
Bra008615.1-P	Field mustard	golgi, plasma membrane, vacuole	62.53	65.23
CDY67254	Canola	golgi, plasma membrane, vacuole	62.53	65.23
CDX69445	Canola	golgi, plasma membrane, vacuole	62.53	65.23
CDX70699	Canola	golgi, plasma membrane, vacuole	61.98	64.66
AT5G16530.1	Thale cress	plasma membrane	62.26	64.39
VIT_04s0023g00320.t01	Wine grape	plasma membrane	62.81	64.04
KRH00905	Soybean	golgi, plasma membrane, vacuole	58.13	57.18
CDX78697	Canola	plasma membrane	61.71	56.85
KRH40330	Soybean	golgi, plasma membrane, vacuole	58.68	56.5
Os08t0529000-01	Rice	plasma membrane	57.58	56.49
Os11t0122800-00	Rice	plasma membrane	41.6	51.01
Os11t0137000-01	Rice	golgi, plasma membrane	46.83	30.69
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	40.22	30.29
Os01t0802700-01	Rice	plasma membrane	35.26	30.05
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	48.21	29.61
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	49.31	28.96
Os02t0743400-01	Rice	plasma membrane	47.11	28.74
Os06t0232300-01	Rice	plasma membrane	46.83	28.72
Os12t0133800-01	Rice	peroxisome, plastid	23.69	28.01
Os06t0660200-01	Rice	plasma membrane	47.66	27.46
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	28.65	25.12

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:4324368	EMBL:AK066552	InterPro:Auxin_eff_plant	ProteinID:BAD87633.1
ProteinID:BAF07128.1	ProteinID:BAS75920.1	ProteinID:FAA00683.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009926
GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:Mem_trans	EnsemblPlantsGene:Os01g0919800	EnsemblPlants:Os01t0919800-01	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF2	UniProt:Q5JLM1	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI00004C2A35	RefSeq:XP_015621857.1
SEG:seg	:	:	:	:	:

Description

PIN PROTEIN 5ASimilar to Efflux carrier of polar auxin transport. (Os01t0919800-01)

Coordinates

chr1:-:40136226..40142760

Molecular Weight (calculated)

38626.9 Da

IEP (calculated)

9.515

GRAVY (calculated)

0.880

Length

363 amino acids

Sequence
(BLAST)

001: MIGWGDVYKV VAATVPLYFA LFLGYGSVRW WRIFTREQCD AVNRLVAFFA LPFFTFEFTL HTDPFQVNYR AVAADVISKA VIVAVIGAWA RFMSKGGCAV
101: SWSITSFSLS TLTNSLVVGV PMARAMYGEW AQQLVVQLSV FQAIVWLTLL LFVLEVRKAA IGMYVDGAEA AAAAGKDVEA AGAAAAAGTV VVAAAAGKPS
201: LWALVKVVAH KLARNPNTYA SFVGITWACL ANRLHIALPS AFEGSVLIMS KSGTGMAMFS MGLFMAQQEK IIACGTSFAA LGLVLKFALG PAAMAIGSIA
301: VGLRGDVLRV AIIQAALPQS ITSFIFAKEY GLHADVLSTA VIFGMLVSLP LLVGFYIVLE LIR

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.