Factsheet for Os01t0802700-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plastid 1
peroxisome 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	plastid
MultiLoc:	peroxisome
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

plasma membrane: 18260611

msms PMID: 18260611 doi

SH Natera, KL Ford, AM Cassin, JH Patterson, EJ Newbigin, A Bacic

Plant Cell Biology Research Centre, VIC, Australia. s.natera@unimelb.edu.au

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G361500.1	Wheat	plasma membrane	75.82	75.47
TraesCS3A01G331300.1	Wheat	plasma membrane	75.59	74.54
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	75.12	74.42
TraesCS3D01G324800.1	Wheat	plasma membrane	75.12	74.25
EES03766	Sorghum	golgi, plasma membrane, vacuole	72.07	69.14
TraesCS7B01G331500.1	Wheat	cytosol, plasma membrane, vacuole	65.26	68.47
Zm00001d043179_P001	Maize	plasma membrane	71.83	68.46
TraesCS7B01G359300.1	Wheat	plasma membrane, vacuole	63.62	67.92
TraesCS7B01G359200.1	Wheat	plasma membrane	62.44	67.68
TraesCS7D01G446900.1	Wheat	plasma membrane	42.25	63.16
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	43.43	60.26
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	49.53	57.81
Os08t0529000-01	Rice	plasma membrane	33.1	38.11
Os01t0919800-01	Rice	plasma membrane	30.05	35.26
Os11t0137000-01	Rice	golgi, plasma membrane	42.25	32.49
Os06t0232300-01	Rice	plasma membrane	44.37	31.93
Os02t0743400-01	Rice	plasma membrane	43.19	30.92
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	42.25	30.46
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	43.9	30.26
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	33.1	29.25
Os12t0133800-01	Rice	peroxisome, plastid	20.19	28.01
Os06t0660200-01	Rice	plasma membrane	40.61	27.46
Os11t0122800-00	Rice	plasma membrane	17.14	24.66
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	17.37	17.87

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:4327533	EMBL:AK059229	InterPro:Auxin_eff_plant	ProteinID:BAD68142.1
ProteinID:BAF06462.1	ProteinID:BAS74810.1	ProteinID:FAA00687.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009926
GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:Mem_trans	EnsemblPlantsGene:Os01g0802700	EnsemblPlants:Os01t0802700-01	PFAM:PF03547	PANTHER:PTHR31752
PANTHER:PTHR31752:SF9	UniProt:Q5VQY3	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI0000457D98	RefSeq:XP_015634219.1
SEG:seg	:	:	:	:	:

Description

PIN PROTEIN 9Auxin efflux carrier domain containing protein. (Os01t0802700-01)

Coordinates

chr1:-:34003692..34006460

Molecular Weight (calculated)

45567.2 Da

IEP (calculated)

8.422

GRAVY (calculated)

0.577

Length

426 amino acids

Sequence
(BLAST)

001: MITGSEVYQV VEAMAPLYTA AALGYGSVRW LKAFSNEQCA GINHFVALYA VPVLIFDMVS TNNVYKMNGR LIAADTLQKA VLLLGLMAWA LWERSRARGA
101: GAKAKAAVSS PLQWVITCFS VASLPNTIIM GVPLLNGMYG PVSKDLMKQI VVMQFCIWYN VIIFLYEYMA ARRSASAPPP ASSEGSAKIS PSSPVKAAAA
201: AADTNGNAVA ADRPQEVAVN IEITEMAAST ARDGVSGETT AAAKEVSSGE VAPVEEEEAS APAPSMKHVI WMAVKKLLQI PNTYASFLGL IWSLIAFKCG
301: FSMPKIVEDS LFTIRTTAVG LSMFSSGTFI ARQSRFVPCG YKIASFSMVI KFLIGPVVML FASLVIGMHG TLLHIAVVQA ALPLAVTSFV YAEEYKVHAD
401: IMSTGVILGI FISLPVTIVY YILLGL

Best Arabidopsis Sequence Match ( AT5G15100.1 )
(BLAST)

001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL

Arabidopsis Description

PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.