Factsheet for TraesCS7D01G446900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
peroxisome 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7B01G359300.1	Wheat	plasma membrane, vacuole	89.47	63.91
TraesCS3D01G324800.1	Wheat	plasma membrane	67.02	44.32
Os01t0802700-01	Rice	plasma membrane	63.16	42.25
EES03766	Sorghum	golgi, plasma membrane, vacuole	61.05	39.19
Zm00001d043179_P001	Maize	plasma membrane	61.4	39.15
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	39.3	36.48
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	42.46	33.15
TraesCS3D01G247700.1	Wheat	plasma membrane	32.28	25.77
TraesCS5D01G291800.1	Wheat	extracellular, plasma membrane, vacuole	29.47	22.89
TraesCS7D01G259700.1	Wheat	plasma membrane, vacuole	28.42	21.32
TraesCS3D01G421600.1	Wheat	plasma membrane	27.37	20.63
TraesCS5D01G293000.1	Wheat	golgi, plasma membrane, vacuole	26.32	19.89
TraesCS5D01G293300.1	Wheat	plasma membrane	26.32	19.89
TraesCS5D01G293100.1	Wheat	golgi, plasma membrane, vacuole	25.96	19.12
TraesCS6D01G287800.1	Wheat	plasma membrane	38.95	18.85
TraesCS3D01G221900.1	Wheat	plasma membrane	37.89	18.31
TraesCS4D01G125300.1	Wheat	plasma membrane	36.14	18.2
TraesCS7D01G191600.1	Wheat	plasma membrane	37.19	18.09
TraesCS7D01G478800.1	Wheat	golgi, plasma membrane, vacuole	38.25	17.22
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	35.79	17.11

Protein Annotations

EnsemblPlants:TraesCS7D01G446900.1	EnsemblPlantsGene:TraesCS7D01G446900	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF9	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:	:

Description

No Description!

Coordinates

chr7D:-:567514284..567515312

Molecular Weight (calculated)

30229.0 Da

IEP (calculated)

6.943

GRAVY (calculated)

0.503

Length

285 amino acids

Sequence
(BLAST)

001: MITGSAVYQV VEAMAPLYTA AALGYASVRW LKAFSEEQCA GINRFVATYA MPALIFDMVS TSDPYAMNGR LVAADTLQKG VMLLGLVAWA VRSSLRRRET
101: SAGNVAASPL QWVVTAFSMA QLPSTIIMGV PILGALYGPT SKDFMKQIVV MQLCVWYNVI IFMYEYMAAK DGSIKVGPAP ASPENVGSTE VAAAQPGMAV
201: ASQTTSTAVV GEVSPTHAAD AEVAEAEDVA LPAPPSMSHV AFVTGKKILK IPNTHAAFLG LFWALIAFKQ VPSFQSSFIL HLAVV

Best Arabidopsis Sequence Match ( AT1G23080.2 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.