Factsheet for TraesCS7D01G259700.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	mitochondrion, peroxisome, secretory
BaCelLo:	secretory
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	92.37	95.64
Os08t0529000-01	Rice	plasma membrane	75.53	77.57
TraesCS5D01G291800.1	Wheat	extracellular, plasma membrane, vacuole	61.58	63.76
PGSC0003DMT400017300	Potato	plasma membrane	16.05	61.62
OQU80833	Sorghum	extracellular	46.84	59.53
Zm00001d031594_P001	Maize	plasma membrane	66.32	57.67
TraesCS5D01G293300.1	Wheat	plasma membrane	53.42	53.85
TraesCS3D01G421600.1	Wheat	plasma membrane	53.16	53.44
TraesCS5D01G293000.1	Wheat	golgi, plasma membrane, vacuole	52.63	53.05
TraesCS5D01G293100.1	Wheat	golgi, plasma membrane, vacuole	53.42	52.45
PGSC0003DMT400046253	Potato	plasma membrane	46.32	49.58
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	45.79	48.6
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	44.47	46.81
PGSC0003DMT400017301	Potato	golgi, plasma membrane	21.32	45.76
Solyc04g056620.1.1	Tomato	plasma membrane	38.95	42.65
TraesCS3D01G247700.1	Wheat	plasma membrane	38.68	41.18
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	33.68	39.88
TraesCS3D01G324800.1	Wheat	plasma membrane	36.58	32.25
TraesCS4D01G125300.1	Wheat	plasma membrane	43.68	29.33
TraesCS3D01G221900.1	Wheat	plasma membrane	45.0	28.98
TraesCS7D01G446900.1	Wheat	plasma membrane	21.32	28.42
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	43.68	27.85
TraesCS6D01G287800.1	Wheat	plasma membrane	42.63	27.5
TraesCS7D01G191600.1	Wheat	plasma membrane	42.37	27.47
TraesCS7D01G478800.1	Wheat	golgi, plasma membrane, vacuole	43.68	26.22

Protein Annotations

EnsemblPlants:TraesCS7D01G259700.1	EnsemblPlantsGene:TraesCS7D01G259700	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Auxin_eff_plant	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF11
PFAM:PF03547	SEG:seg	TIGRFAMs:TIGR00946	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1

Description

No Description!

Coordinates

chr7D:-:235395264..235397384

Molecular Weight (calculated)

40510.9 Da

IEP (calculated)

8.663

GRAVY (calculated)

0.676

Length

380 amino acids

Sequence
(BLAST)

001: MIALGDIYKV VEAMAPLYFA LGLGYGSVRW WRFFTAEQCG AINTLGVCFS MPFFTFDFVV RADPYAMNYR VIAADAVTKL LAVLAAAVWA RCAKAKAGAY
101: SWSITGFSLG AYNNTLVVGV PLLDAMYGKW AQDLIVQIAV VQAIVWFPLL LLAFELRKAW VVGGGVSSLS ATMAHDDGST SSDDDRARRV EPVSHSDVEV
201: DLDVEAAPPT GGRRIRLWLM ASTVGMKLAR NPNVYASVLG VAWACIAYRW RIGMPGIVTG SLQVMSRTGT GMSMFSMGLF MAQQERIVAC GGGLAALGMV
301: LRFVAGPLAA LAGAGAVAFG LRGDVLRFVI IQAALPQSIA SFVFAKEYGL HADVLSTAVI FGTLVSLPVL IGYYGVLGIV

Best Arabidopsis Sequence Match ( AT5G15100.1 )
(BLAST)

001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL

Arabidopsis Description

PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.