Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc04g056620.1.1 | Tomato | plasma membrane | 92.83 | 85.88 |
| PGSC0003DMT400017301 | Potato | golgi, plasma membrane | 28.35 | 51.41 |
| PGSC0003DMT400046253 | Potato | plasma membrane | 50.16 | 45.35 |
| VIT_04s0023g00450.t01 | Wine grape | golgi, plasma membrane | 42.06 | 37.4 |
| TraesCS7A01G258800.1 | Wheat | plasma membrane, vacuole | 40.19 | 35.15 |
| Os08t0529000-01 | Rice | plasma membrane | 39.88 | 34.59 |
| TraesCS5D01G291800.1 | Wheat | extracellular, plasma membrane, vacuole | 38.63 | 33.79 |
| TraesCS7D01G259700.1 | Wheat | plasma membrane, vacuole | 39.88 | 33.68 |
| TraesCS5A01G284500.1 | Wheat | extracellular, plasma membrane, vacuole | 38.01 | 33.42 |
| TraesCS5B01G283500.1 | Wheat | extracellular, plasma membrane, vacuole | 38.32 | 33.42 |
| TraesCS5B01G283600.1 | Wheat | plasma membrane | 37.69 | 33.24 |
| Zm00001d006082_P001 | Maize | extracellular, plasma membrane, vacuole | 37.69 | 33.15 |
| TraesCS5A01G286000.1 | Wheat | plasma membrane | 36.76 | 33.05 |
| KXG35972 | Sorghum | extracellular, plasma membrane, vacuole | 37.38 | 32.34 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 26.17 | 32.31 |
| OQU80833 | Sorghum | extracellular | 29.91 | 32.11 |
| HORVU5Hr1G076210.1 | Barley | plasma membrane | 36.76 | 31.98 |
| TraesCS5D01G293300.1 | Wheat | plasma membrane | 37.38 | 31.83 |
| TraesCS5D01G293000.1 | Wheat | golgi, plasma membrane, vacuole | 36.76 | 31.3 |
| TraesCS5B01G284900.1 | Wheat | golgi, plasma membrane, vacuole | 36.45 | 31.03 |
| TraesCS5B01G285000.1 | Wheat | plasma membrane | 36.76 | 30.49 |
| TraesCS5A01G285700.1 | Wheat | golgi, plasma membrane, vacuole | 36.76 | 30.49 |
| PGSC0003DMT400017300 | Potato | plasma membrane | 9.35 | 30.3 |
| TraesCS5D01G293100.1 | Wheat | golgi, plasma membrane, vacuole | 36.45 | 30.23 |
| Zm00001d031594_P001 | Maize | plasma membrane | 38.01 | 27.92 |
| HORVU5Hr1G076120.2 | Barley | golgi, plasma membrane, vacuole | 23.05 | 27.41 |
| PGSC0003DMT400079013 | Potato | plasma membrane | 36.76 | 22.35 |
| PGSC0003DMT400072459 | Potato | golgi, plasma membrane | 38.63 | 21.12 |
| PGSC0003DMT400021600 | Potato | golgi, plasma membrane | 38.32 | 20.71 |
| PGSC0003DMT400014752 | Potato | golgi, plasma membrane | 39.56 | 20.68 |
| PGSC0003DMT400048251 | Potato | plasma membrane | 39.88 | 20.29 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 40.19 | 19.72 |
| Os09t0505400-00 | Rice | mitochondrion, nucleus, peroxisome | 17.76 | 13.77 |
| HORVU5Hr1G076060.2 | Barley | mitochondrion | 14.95 | 13.19 |
| PGSC0003DMT400015267 | Potato | cytosol | 18.69 | 12.93 |
Protein Annotations
| EnsemblPlants:PGSC0003DMT400027309 | EnsemblPlantsGene:PGSC0003DMG400010532 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | ncoils:Coil | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF2 |
| PFAM:PF03547 | PGSC:PGSC0003DMG400010532 | TMHMM:TMhelix | UniParc:UPI00029523AA | UniProt:M1APH6 | MapMan:11.2.4.1.1 |
| MapMan:24.2.5.2.1 | : | : | : | : | : |
Description
Auxin efflux carrier component [Source:PGSC_GENE;Acc:PGSC0003DMG400010532]
Coordinates
chr4:+:49481160..49482767
Molecular Weight (calculated)
35911.5 Da
IEP (calculated)
7.418
GRAVY (calculated)
0.620
Length
321 amino acids
Sequence
(BLAST)
(BLAST)
001: MIEWLDIYKV IEAMMPLYLA LGLGYGSVKW WHKLSAEHCD AINRLNYFFV LPFFTFDFIS QVNPYKMNYP FICGDLIAKA IIGFFLTLWA NFYSKGNFSW
101: SITTFSFCSL TNALVMGIPV MNAMSPQVGV DLVIQSLAIQ FLIWSIIIQF MMELKNAKDE IMACEGANQD LEGNDNNNAS KNTTPSLGSV MTIVWTKLSK
201: NPNFYACFLG IMWSLVADRW HFVLPNIVKE CISIMSKAGS GIGMFTIGVF VAMQQKVMAG GTGVIVFGLF LRFFIGPATM TIGSFVVGLH GNVLRASILQ
301: VILSPYSLSF LNHTEYIVII I
101: SITTFSFCSL TNALVMGIPV MNAMSPQVGV DLVIQSLAIQ FLIWSIIIQF MMELKNAKDE IMACEGANQD LEGNDNNNAS KNTTPSLGSV MTIVWTKLSK
201: NPNFYACFLG IMWSLVADRW HFVLPNIVKE CISIMSKAGS GIGMFTIGVF VAMQQKVMAG GTGVIVFGLF LRFFIGPATM TIGSFVVGLH GNVLRASILQ
301: VILSPYSLSF LNHTEYIVII I
001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTA
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTA
Arabidopsis Description
PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.