Factsheet for PGSC0003DMT400003569

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 5
vacuole 4
plasma membrane 7
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc02g087660.2.1	Tomato	plasma membrane	95.77	69.75
VIT_14s0108g00020.t01	Wine grape	endoplasmic reticulum, plasma membrane	67.69	49.3
KRH40132	Soybean	plasma membrane	63.08	45.81
KRH01128	Soybean	plasma membrane	63.08	45.68
Bra008722.1-P	Field mustard	golgi, plasma membrane, vacuole	58.08	44.28
CDX69551	Canola	endoplasmic reticulum, extracellular, vacuole	38.08	44.2
KRH58174	Soybean	endoplasmic reticulum, plasma membrane	59.62	42.82
KRH04363	Soybean	endoplasmic reticulum, plasma membrane	59.62	42.7
TraesCS3A01G243700.1	Wheat	plasma membrane	57.69	42.02
AT5G15100.1	Thale cress	plasma membrane	59.23	41.96
HORVU3Hr1G067670.3	Barley	plasma membrane	57.31	41.74
TraesCS3D01G247700.1	Wheat	plasma membrane	56.92	41.46
TraesCS3B01G276500.1	Wheat	plasma membrane	56.92	41.46
CDX85565	Canola	plasma membrane	56.54	40.61
EES03524	Sorghum	plasma membrane	56.15	40.33
Zm00001d043660_P001	Maize	plasma membrane	55.38	39.78
PGSC0003DMT400017301	Potato	golgi, plasma membrane	26.54	38.98
PGSC0003DMT400017300	Potato	plasma membrane	14.62	38.38
CDY63766	Canola	golgi, plasma membrane	40.0	35.02
CDY66594	Canola	plasma membrane	60.0	34.74
PGSC0003DMT400046253	Potato	plasma membrane	41.54	30.42
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	55.77	30.08
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	32.31	26.17
PGSC0003DMT400079013	Potato	plasma membrane	49.62	24.43
PGSC0003DMT400021600	Potato	golgi, plasma membrane	53.85	23.57
PGSC0003DMT400072459	Potato	golgi, plasma membrane	51.92	23.0
Bra023503.1-P	Field mustard	golgi, plasma membrane	52.31	22.78
PGSC0003DMT400014752	Potato	golgi, plasma membrane	52.69	22.31
PGSC0003DMT400048251	Potato	plasma membrane	53.08	21.87
PGSC0003DMT400078330	Potato	golgi, plasma membrane	54.23	21.56
PGSC0003DMT400015267	Potato	cytosol	22.69	12.72

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005783	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0007275	GO:GO:0008150
GO:GO:0009555	GO:GO:0009719	GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	UniProt:M0ZLX8	InterPro:Mem_trans	PFAM:PF03547	EnsemblPlantsGene:PGSC0003DMG400001412
PGSC:PGSC0003DMG400001412	EnsemblPlants:PGSC0003DMT400003569	PANTHER:PTHR31752	PANTHER:PTHR31752:SF10	TMHMM:TMhelix	UniParc:UPI000294DFFA
SEG:seg	:	:	:	:	:

Description

Auxin efflux carrier component [Source:PGSC_GENE;Acc:PGSC0003DMG400001412]

Coordinates

chr2:+:46450539..46452728

Molecular Weight (calculated)

28409.0 Da

IEP (calculated)

9.702

GRAVY (calculated)

0.837

Length

260 amino acids

Sequence
(BLAST)

001: MISLRDVYHV VAATIPLYVV MILAYISVRW GKLFSPEQCS GINKFVAKFS IPLLSFQVIS GSNLYKVNLK LLLADFIQKF LAVFLLAIFA KLKPKGNLTW
101: IITGLSVSTL PNTLILGIPL IKAIFGDAAA ELLAQLIALQ SLVWYNLLLL LFELNATKES YMMSPSEVAV ELEVPGEPEL EKDGVFMASQ ASIIACGTKK
201: AILAMALKFV LGPVLMAISS IAVGLRGQLF RLAIVQAALP QGIVPFVFAK EYNIHPTILR

Best Arabidopsis Sequence Match ( AT1G23080.2 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.