Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03524 | Sorghum | plasma membrane | 93.65 | 93.65 |
| TraesCS3D01G247700.1 | Wheat | plasma membrane | 80.66 | 81.79 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 80.66 | 81.79 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 80.39 | 81.51 |
| TraesCS3A01G243700.1 | Wheat | plasma membrane | 80.11 | 81.23 |
| Os01t0715600-00 | Rice | peroxisome, plasma membrane, plastid | 79.01 | 59.34 |
| VIT_14s0108g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 56.35 | 57.14 |
| Solyc02g087660.2.1 | Tomato | plasma membrane | 54.7 | 55.46 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 39.78 | 55.38 |
| KRH40132 | Soybean | plasma membrane | 54.7 | 55.31 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 33.98 | 54.91 |
| KRH01128 | Soybean | plasma membrane | 53.59 | 54.04 |
| AT5G15100.1 | Thale cress | plasma membrane | 54.42 | 53.68 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 53.31 | 53.31 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 53.04 | 52.89 |
| Bra008722.1-P | Field mustard | golgi, plasma membrane, vacuole | 48.9 | 51.91 |
| CDX85565 | Canola | plasma membrane | 50.55 | 50.55 |
| CDY63766 | Canola | golgi, plasma membrane | 39.23 | 47.81 |
| CDY66594 | Canola | plasma membrane | 53.04 | 42.76 |
| Zm00001d042345_P001 | Maize | plasma membrane | 40.06 | 37.96 |
| Zm00001d006082_P001 | Maize | extracellular, plasma membrane, vacuole | 35.91 | 35.62 |
| Zm00001d045219_P001 | Maize | plasma membrane | 53.87 | 33.56 |
| Zm00001d018024_P001 | Maize | plasma membrane | 53.31 | 32.44 |
| Zm00001d031594_P001 | Maize | plasma membrane | 38.95 | 32.27 |
| Zm00001d052269_P001 | Maize | plasma membrane | 53.04 | 32.16 |
| Zm00001d043179_P001 | Maize | plasma membrane | 39.5 | 31.99 |
| Zm00001d044083_P001 | Maize | plasma membrane | 53.87 | 31.97 |
| Zm00001d052442_P001 | Maize | plasma membrane | 50.55 | 31.94 |
| Zm00001d044812_P001 | Maize | plasma membrane | 52.76 | 31.78 |
| Zm00001d046893_P001 | Maize | golgi, plasma membrane, vacuole | 50.83 | 28.93 |
| Bra023503.1-P | Field mustard | golgi, plasma membrane | 45.03 | 27.3 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | UniProt:A0A1D6NE27 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 |
| GO:GO:0007275 | GO:GO:0008150 | GO:GO:0009555 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0010252 | GO:GO:0010315 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans |
| ProteinID:ONM38739.1 | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF10 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix |
| UniParc:UPI0002208B70 | EnsemblPlantsGene:Zm00001d043660 | EnsemblPlants:Zm00001d043660_P001 | EnsemblPlants:Zm00001d043660_T001 | SEG:seg | : |
Description
PIN-formed protein8 PIN-formed protein8
Coordinates
chr3:+:206187330..206189862
Molecular Weight (calculated)
39943.9 Da
IEP (calculated)
9.078
GRAVY (calculated)
0.634
Length
362 amino acids
Sequence
(BLAST)
(BLAST)
001: MISWPTIYHV LEETVPLYVA MIVAYLSIQW WKLFTPEQCS GINKFVAKFS IPLLSFQILS TNNPYSMNLK LIFSDVLQKS LSLLGFAVAS RVCCEEKFDW
101: LITGFSLSTL PNTLIVGIPL LKGMYGDEAV KLLSQIVALQ SLIWYTLLLF LFEFRAARGM AITTSSEAID EAESGTPGPM QQGHEEGQAK GVSARCYGAF
201: HFLLVVSRKL VTNPNMYASL AGLIWALISF RWRIQLPSIV NNSIRILSDG GLGMAMFSLG VFTALQTKIV ACGTKRMLLS LGIRFFLGPG LMVISSYLIG
301: MRGTLLKVAI IQAALPQGIV PFVFAKEYNV HADILSTAII LGMMVAVPVA LGYYFVMDHP RL
101: LITGFSLSTL PNTLIVGIPL LKGMYGDEAV KLLSQIVALQ SLIWYTLLLF LFEFRAARGM AITTSSEAID EAESGTPGPM QQGHEEGQAK GVSARCYGAF
201: HFLLVVSRKL VTNPNMYASL AGLIWALISF RWRIQLPSIV NNSIRILSDG GLGMAMFSLG VFTALQTKIV ACGTKRMLLS LGIRFFLGPG LMVISSYLIG
301: MRGTLLKVAI IQAALPQGIV PFVFAKEYNV HADILSTAII LGMMVAVPVA LGYYFVMDHP RL
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.