Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 4
- plasma membrane 6
- golgi 4
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400003569 | Potato | plasma membrane | 49.3 | 67.69 |
| Solyc02g087660.2.1 | Tomato | plasma membrane | 66.67 | 66.67 |
| KRH01128 | Soybean | plasma membrane | 63.59 | 63.23 |
| KRH40132 | Soybean | plasma membrane | 63.03 | 62.85 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 62.47 | 61.43 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 62.18 | 61.33 |
| AT5G15100.1 | Thale cress | plasma membrane | 61.62 | 59.95 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 57.98 | 57.98 |
| TraesCS3D01G247700.1 | Wheat | plasma membrane | 57.7 | 57.7 |
| TraesCS3A01G243700.1 | Wheat | plasma membrane | 57.42 | 57.42 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 57.42 | 57.42 |
| EES03524 | Sorghum | plasma membrane | 57.98 | 57.18 |
| Bra008722.1-P | Field mustard | golgi, plasma membrane, vacuole | 54.06 | 56.6 |
| Zm00001d043660_P001 | Maize | plasma membrane | 57.14 | 56.35 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 35.29 | 56.25 |
| CDX85565 | Canola | plasma membrane | 56.02 | 55.25 |
| CDY63766 | Canola | golgi, plasma membrane | 45.1 | 54.21 |
| CDY66594 | Canola | plasma membrane | 59.38 | 47.22 |
| Os01t0715600-00 | Rice | peroxisome, plasma membrane, plastid | 56.86 | 42.12 |
| VIT_04s0023g00320.t01 | Wine grape | plasma membrane | 41.46 | 41.57 |
| VIT_05s0062g01120.t01 | Wine grape | plasma membrane | 51.54 | 39.74 |
| VIT_04s0023g00330.t01 | Wine grape | extracellular, golgi | 8.68 | 36.9 |
| VIT_18s0001g15420.t01 | Wine grape | plasma membrane | 55.18 | 35.82 |
| VIT_04s0023g00450.t01 | Wine grape | golgi, plasma membrane | 34.73 | 34.35 |
| VIT_17s0000g02420.t01 | Wine grape | plasma membrane | 56.86 | 34.18 |
| VIT_08s0040g01230.t01 | Wine grape | golgi, plasma membrane | 57.14 | 34.17 |
| VIT_08s0040g01220.t01 | Wine grape | plasma membrane | 56.58 | 33.72 |
| VIT_11s0052g00440.t01 | Wine grape | plasma membrane | 56.58 | 32.06 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 58.26 | 32.05 |
| Bra023503.1-P | Field mustard | golgi, plasma membrane | 49.58 | 29.65 |
Protein Annotations
| EntrezGene:100259491 | wikigene:100259491 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | UniProt:A5ACS3 | EMBL:AM423345 |
| InterPro:Auxin_eff_plant | ProteinID:CAN79928 | ProteinID:CAN79928.1 | ProteinID:CBI22158 | ProteinID:CBI22158.3 | EMBL:FN595239 |
| GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 |
| GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 |
| GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 |
| GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EntrezGene:LOC100259491 | wikigene:LOC100259491 |
| InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF10 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix |
| UniParc:UPI0001523972 | ArrayExpress:VIT_14s0108g00020 | EnsemblPlantsGene:VIT_14s0108g00020 | EnsemblPlants:VIT_14s0108g00020.t01 | RefSeq:XP_002282480 | RefSeq:XP_002282480.1 |
| SEG:seg | : | : | : | : | : |
Description
Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A5ACS3]
Coordinates
chr14:-:28863625..28865569
Molecular Weight (calculated)
39177.5 Da
IEP (calculated)
9.957
GRAVY (calculated)
0.721
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLADVYHV VAATIPLYFV MILAYISVKW WKIFTPEQCS GINKFVAKFS IPLLSFQLIS ENNPYQMNMR LILSDFLQKL LALILLATIA KINSRGSLTW
101: VITGLSLSTL PNTLILGIPL LKAMYGDKAA GLLSQIVVLQ SLVWYNLLLF LFELNAMKAV SATTPLEAAV ELEAPQEAQP KEEREEGKTT ATRKTKTMLI
201: LRIVGRKLMM NPNTHATIVS LIWACIRFRW NVKLPGVVDD SISILSKGGL GMAMFSLGLF MASRPSIIAC GTRLAVLAMG MKFLVGPAIM AASASITLSR
301: GTLFKVSIVQ ACLPQGIVPF VFAKEYDVHP DILSTGVIFG MLIALPIALV YYFLLAL
101: VITGLSLSTL PNTLILGIPL LKAMYGDKAA GLLSQIVVLQ SLVWYNLLLF LFELNAMKAV SATTPLEAAV ELEAPQEAQP KEEREEGKTT ATRKTKTMLI
201: LRIVGRKLMM NPNTHATIVS LIWACIRFRW NVKLPGVVDD SISILSKGGL GMAMFSLGLF MASRPSIIAC GTRLAVLAMG MKFLVGPAIM AASASITLSR
301: GTLFKVSIVQ ACLPQGIVPF VFAKEYDVHP DILSTGVIFG MLIALPIALV YYFLLAL
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.