Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G247700.1 | Wheat | plasma membrane | 98.88 | 98.88 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 98.32 | 98.32 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 97.48 | 97.48 |
| EES03524 | Sorghum | plasma membrane | 82.35 | 81.22 |
| Zm00001d043660_P001 | Maize | plasma membrane | 81.23 | 80.11 |
| Os01t0715600-00 | Rice | peroxisome, plasma membrane, plastid | 82.07 | 60.79 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 42.02 | 57.69 |
| VIT_14s0108g00020.t01 | Wine grape | endoplasmic reticulum, plasma membrane | 57.42 | 57.42 |
| KRH40132 | Soybean | plasma membrane | 56.02 | 55.87 |
| Solyc02g087660.2.1 | Tomato | plasma membrane | 55.46 | 55.46 |
| KRH01128 | Soybean | plasma membrane | 55.74 | 55.43 |
| CDX69551 | Canola | endoplasmic reticulum, extracellular, vacuole | 34.73 | 55.36 |
| AT5G15100.1 | Thale cress | plasma membrane | 55.18 | 53.68 |
| KRH58174 | Soybean | endoplasmic reticulum, plasma membrane | 54.06 | 53.31 |
| KRH04363 | Soybean | endoplasmic reticulum, plasma membrane | 53.78 | 52.89 |
| Bra008722.1-P | Field mustard | golgi, plasma membrane, vacuole | 49.86 | 52.2 |
| CDX85565 | Canola | plasma membrane | 52.38 | 51.66 |
| CDY63766 | Canola | golgi, plasma membrane | 40.06 | 48.15 |
| CDY66594 | Canola | plasma membrane | 54.06 | 42.98 |
| TraesCS7A01G258800.1 | Wheat | plasma membrane, vacuole | 40.62 | 39.51 |
| TraesCS5A01G284500.1 | Wheat | extracellular, plasma membrane, vacuole | 40.06 | 39.18 |
| TraesCS3A01G426700.1 | Wheat | plasma membrane | 40.9 | 38.73 |
| TraesCS5A01G286000.1 | Wheat | plasma membrane | 36.41 | 36.41 |
| TraesCS5A01G285700.1 | Wheat | golgi, plasma membrane, vacuole | 37.82 | 34.88 |
| TraesCS4A01G188100.1 | Wheat | plasma membrane | 53.78 | 33.8 |
| TraesCS3A01G331300.1 | Wheat | plasma membrane | 40.62 | 33.56 |
| TraesCS7A01G190600.1 | Wheat | plasma membrane | 54.9 | 33.39 |
| TraesCS6A01G308600.1 | Wheat | plasma membrane | 54.9 | 33.33 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 55.46 | 33.28 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 51.54 | 30.72 |
| TraesCS7A01G492400.1 | Wheat | golgi, plasma membrane, vacuole | 53.5 | 30.22 |
| Bra023503.1-P | Field mustard | golgi, plasma membrane | 47.62 | 28.48 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 |
| GO:GO:0005737 | GO:GO:0005783 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0007275 |
| GO:GO:0008150 | GO:GO:0009555 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 |
| PANTHER:PTHR31752:SF10 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | EnsemblPlantsGene:TraesCS3A01G243700 | EnsemblPlants:TraesCS3A01G243700.1 | : |
Description
No Description!
Coordinates
chr3A:-:456920839..456922776
Molecular Weight (calculated)
39196.3 Da
IEP (calculated)
9.108
GRAVY (calculated)
0.805
Length
357 amino acids
Sequence
(BLAST)
(BLAST)
001: MISWVAIYHV LEATTPLYVA MILAYLSIKW WKLFTPEQCS GINKFVANFS IPLLSFQVIS TNNPYDMNLK LIFADILQKS IALLGFAAIS RACCAEKFDW
101: LITGFSLSTL PNTLIVGIPL LKGMYGDEAV KLISQIVVLQ SLIWYTLLLF LLEFRATKGI AAAPSSEIVD EEEAGTLGAT QQTYQEGQSK GVSARCSRAF
201: RFLLVIGMKL VMNPNIYACL IGLIWALISF RWQIQLPLII SNSIRILSDG GLGMAMFSLG LFTALQTKII ACGTKKMLLS LGIRFFLGPA LMMISSYAVG
301: MRGILLKVAI VQAALPQGVV PFVFAKEYNV HADILSTAII VGMMVAVPAT LAYYFVI
101: LITGFSLSTL PNTLIVGIPL LKGMYGDEAV KLISQIVVLQ SLIWYTLLLF LLEFRATKGI AAAPSSEIVD EEEAGTLGAT QQTYQEGQSK GVSARCSRAF
201: RFLLVIGMKL VMNPNIYACL IGLIWALISF RWQIQLPLII SNSIRILSDG GLGMAMFSLG LFTALQTKII ACGTKKMLLS LGIRFFLGPA LMMISSYAVG
301: MRGILLKVAI VQAALPQGVV PFVFAKEYNV HADILSTAII VGMMVAVPAT LAYYFVI
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.