Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 96.76 | 97.66 |
| TraesCS3D01G324800.1 | Wheat | plasma membrane | 96.3 | 96.52 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 93.75 | 94.19 |
| Os01t0802700-01 | Rice | plasma membrane | 74.54 | 75.59 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 72.92 | 70.95 |
| Zm00001d043179_P001 | Maize | plasma membrane | 71.3 | 68.9 |
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 44.44 | 62.54 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 48.84 | 57.81 |
| TraesCS3A01G243700.1 | Wheat | plasma membrane | 33.56 | 40.62 |
| TraesCS7A01G258800.1 | Wheat | plasma membrane, vacuole | 31.71 | 37.33 |
| TraesCS5A01G284500.1 | Wheat | extracellular, plasma membrane, vacuole | 31.48 | 37.26 |
| TraesCS3A01G426700.1 | Wheat | plasma membrane | 29.86 | 34.22 |
| TraesCS5A01G285700.1 | Wheat | golgi, plasma membrane, vacuole | 30.56 | 34.11 |
| TraesCS5A01G286000.1 | Wheat | plasma membrane | 28.01 | 33.89 |
| TraesCS7A01G190600.1 | Wheat | plasma membrane | 41.2 | 30.32 |
| TraesCS4A01G188100.1 | Wheat | plasma membrane | 39.81 | 30.28 |
| TraesCS6A01G308600.1 | Wheat | plasma membrane | 41.2 | 30.27 |
| TraesCS1A01G415400.1 | Wheat | golgi, plasma membrane, vacuole | 39.12 | 28.21 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 38.66 | 28.07 |
| TraesCS7A01G492400.1 | Wheat | golgi, plasma membrane, vacuole | 38.19 | 26.11 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G331300.1 | EnsemblPlantsGene:TraesCS3A01G331300 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF9 | PFAM:PF03547 |
| SEG:seg | TMHMM:TMhelix | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | : | : |
Description
No Description!
Coordinates
chr3A:-:575870203..575872143
Molecular Weight (calculated)
45990.8 Da
IEP (calculated)
9.292
GRAVY (calculated)
0.559
Length
432 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWLAVYHV VEAMAPLYTA AVLGYASVRW LKAFSEEQCA GINHFVAIYA VPVLIFNMVS TNNPYAMNGR LVAADTLQKA VMLLGLVAWA AWESRSRRRR
101: RSDGGGKASA AVAAASPLQW VVTAFSVASL PNTIIMGVPL LGGMYGAMSK DLMKQIVVMQ FCVWYNVVIF IYEYMAARRA ATAMDGTAKI SPGSPGAAPS
201: AEKIAPNDEA VVAAKRAHEV TVNIEITEVA PASTAQKDLA DNTTTTVAKE TSADAEAEQG SPPPAKSTAP SVTHIALMAG KKVLKIPNTY ASFLGLIWAL
301: IAFKCGIKMP KIIDDSLFTI QTTAVGLSMF ASGTFIARQS RFVPSGYAIA SMSMVLKFLI GPVVMLLASL AIGMHGTLLH IAVVQAALPL AVTSFVYAEE
401: YKVHADIMST GVILGIFISL PVTIVYYILL GL
101: RSDGGGKASA AVAAASPLQW VVTAFSVASL PNTIIMGVPL LGGMYGAMSK DLMKQIVVMQ FCVWYNVVIF IYEYMAARRA ATAMDGTAKI SPGSPGAAPS
201: AEKIAPNDEA VVAAKRAHEV TVNIEITEVA PASTAQKDLA DNTTTTVAKE TSADAEAEQG SPPPAKSTAP SVTHIALMAG KKVLKIPNTY ASFLGLIWAL
301: IAFKCGIKMP KIIDDSLFTI QTTAVGLSMF ASGTFIARQS RFVPSGYAIA SMSMVLKFLI GPVVMLLASL AIGMHGTLLH IAVVQAALPL AVTSFVYAEE
401: YKVHADIMST GVILGIFISL PVTIVYYILL GL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.