CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d043179_P001	Maize	plasma membrane	81.31	80.76
TraesCS3B01G361500.1	Wheat	plasma membrane	71.17	73.83
TraesCS3D01G324800.1	Wheat	plasma membrane	71.4	73.55
TraesCS3A01G331300.1	Wheat	plasma membrane	70.95	72.92
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	70.05	72.33
Os01t0802700-01	Rice	plasma membrane	69.14	72.07
TraesCS7B01G359300.1	Wheat	plasma membrane, vacuole	60.59	67.42
TraesCS7B01G331500.1	Wheat	cytosol, plasma membrane, vacuole	59.91	65.52
TraesCS7B01G359200.1	Wheat	plasma membrane	56.08	63.36
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	43.69	63.19
TraesCS7D01G446900.1	Wheat	plasma membrane	39.19	61.05
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	47.3	57.53
EES03524	Sorghum	plasma membrane	32.21	39.5
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	30.86	36.93
KXG33996	Sorghum	plasma membrane	29.05	34.31
EES05538	Sorghum	golgi, plasma membrane	43.24	31.74
EER88128	Sorghum	golgi, plasma membrane	43.02	31.52
EES09211	Sorghum	golgi, plasma membrane	40.54	30.87
EER89254	Sorghum	golgi, plasma membrane, vacuole	38.51	28.5
OQU80833	Sorghum	extracellular	18.92	28.09
EER88769	Sorghum	plasma membrane	37.61	26.68
EES01159	Sorghum	golgi, plasma membrane	38.96	26.49

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:8055260	InterPro:Auxin_eff_plant	UniProt:C5XMI2	EnsemblPlants:EES03766
ProteinID:EES03766	ProteinID:EES03766.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987
GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF9	EnsemblPlantsGene:SORBI_3003G327500	TIGRFAMs:TIGR00946
TMHMM:TMhelix	UniParc:UPI0001A8577D	RefSeq:XP_002458646.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr3:-:65308098..65311355

Molecular Weight (calculated)

47686.5 Da

IEP (calculated)

6.888

GRAVY (calculated)

0.567

Length

444 amino acids

Sequence
(BLAST)

001: MIPGSAVYHV VEAMAPLYTA AVLGYASVRW LKAFSDEQCA GINHFVALYA VPVLIFHMVS TNDPYHMNER LIAADTLQKA VMLLALTAWA FWSHFRRRRD
101: GKASSASAAS PIKWVVTNFS VASLPNTIIM GVPLLDGMYG SVSGGLMKQI VVMQFCIWYN VVIFLYEFMA ARDGTAKISP ATVPPAAAAA ENRDRVIIDE
201: NGGSSIHEHD HRSHHQVVVN IEITEVAAAA VASTPTAPVD GAAAAKELMS ADDAGDGDAD ANNNKAAVDV VPPPTPVQPQ VPSVMHVVWM ATKKLLQIPN
301: TYASFLGLIW SLMAFKIGFS MPKIVGDSLF IIYTTAVGLS MFASGTFIAR QSRFVPCGYT IASLSMVLKF LIGPIIMLLA SLAVGMHGTL LHIAVVQAAL
401: PLAVTSFVYA EEYKVHADIM STGVILGIFI SLPVTIVYYI LLGL

Best Arabidopsis Sequence Match ( AT1G23080.2 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.