CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 5
plasma membrane 7
golgi 6
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d052442_P001	Maize	plasma membrane	87.99	89.53
Os12t0133800-01	Rice	peroxisome, plastid	45.97	87.3
TraesCS4D01G125300.1	Wheat	plasma membrane	82.85	85.34
TraesCS4B01G130100.1	Wheat	plasma membrane	82.85	85.34
Os11t0137000-01	Rice	golgi, plasma membrane	80.79	85.02
TraesCS4A01G188100.1	Wheat	plasma membrane	82.68	84.86
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	68.27	71.45
GSMUA_Achr8P09440_001	Banana	plasma membrane	66.9	71.43
KRH66749	Soybean	plasma membrane	69.81	68.17
PGSC0003DMT400021600	Potato	golgi, plasma membrane	67.41	66.16
Solyc10g078370.1.1	Tomato	golgi, plasma membrane	67.41	66.16
PGSC0003DMT400072459	Potato	golgi, plasma membrane	66.21	65.76
Solyc10g080880.1.1	Tomato	golgi, plasma membrane	66.04	65.7
KRG95082	Soybean	plasma membrane	52.32	63.41
EER88128	Sorghum	golgi, plasma membrane	65.35	62.87
EES05538	Sorghum	golgi, plasma membrane	65.01	62.64
HORVU4Hr1G026680.4	Barley	plastid	82.16	61.33
EER88769	Sorghum	plasma membrane	60.55	56.39
EES01159	Sorghum	golgi, plasma membrane	62.26	55.59
EER89254	Sorghum	golgi, plasma membrane, vacuole	54.72	53.17
EES03524	Sorghum	plasma membrane	32.76	52.76
KXG33996	Sorghum	plasma membrane	29.67	46.01
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	28.82	45.28
VIT_04s0023g00330.t01	Wine grape	extracellular, golgi	6.17	42.86
EES03766	Sorghum	golgi, plasma membrane, vacuole	30.87	40.54
OQU80833	Sorghum	extracellular	16.3	31.77

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:8085610	InterPro:Auxin_eff_plant	UniProt:C5Y431	EnsemblPlants:EES09211
ProteinID:EES09211	ProteinID:EES09211.1	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009926	GO:GO:0009987
GO:GO:0010252	GO:GO:0010315	GO:GO:0010329	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF14	EnsemblPlantsGene:SORBI_3005G025900	TIGRFAMs:TIGR00946
TMHMM:TMhelix	UniParc:UPI0001A86755	RefSeq:XP_002450223.1	SEG:seg	:	:

Description

hypothetical protein

Coordinates

chr5:-:2298782..2302410

Molecular Weight (calculated)

61787.3 Da

IEP (calculated)

9.591

GRAVY (calculated)

0.416

Length

583 amino acids

Sequence
(BLAST)

001: MITALDLYHV LTAVVPLYVA MTLAYGSVRW WRIFTPDQCS GINRFVALFA VPLLSFHFIS TNNPFAMNLR FLAADTLQKV AVLALLFLAS RLFSSSASRF
101: LGLDWSITLF SLSTLPNTLV MGIPLLRGMY GGGGASSSSI DAGTLMVQVV VLQCIIWYTL MLFLFEYRAA RALVLDQFPD GAAASIVSFR VDSDVVSLAR
201: GEIELEADAV PVPAGGDGGR VRVTVRKSTS SRSEAACSHS HSHSQSMQPR VSNLSGVEIY SLQSSRNPTP RGSSFNHTDF FNIVGAGAKG GAAAAAAGDE
301: EKGGAGGHSP QPQAVAAVAA KRKDLHMLVW SSSASPVSER AAGAAVHVFG AGAADHADVL AKGTQAYDEY GRDDFSRTKN GNGADKGGPT LSKLGSNSTA
401: QLYPKDDGEG RPAAAMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGVIWS LVSYRWGIQM PAIIARSISI LSDAGLGMAM FSLGLFMALQ PRIIACGNKF
501: AVIAMAVRFL AGPAVMAAAS IAVGLRGVLL HIAIVQAALP QGIVPFVFAK EYNVHPDILS TAVIFGMLIA LPITLVYYIL LGL

Best Arabidopsis Sequence Match ( AT2G01420.1 )
(BLAST)

001: MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAEIGNDG
201: KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSLSSTPRGS NFNHSDFYSV MGFPGGRLSN FGPADLYSVQ SSRGPTPRPS NFEENNAVKY GFYNNTNSSV
301: PAAGSYPAPN PEFSTGTGVS TKPNKIPKEN QQQLQEKDSK ASHDAKELHM FVWSSSASPV SDVFGGGAGD NVATEQSEQG AKEIRMVVSD QPRKSGGDDI
401: GGLDSGEGER EIEKATAGLN KMGSNSTAEL EAAGGDGGGN NGTHMPPTSV MTRLILIMVW RKLIRNPNTY SSLIGLIWAL VAYRWHVAMP KILQQSISIL
501: SDAGLGMAMF SLGLFMALQP KIIACGNSVA TFAMAVRFIT GPAIMAVAGI AIGLHGDLLR IAIVQAALPQ GIVPFVFAKE YNVHPTILST GVIFGMLIAL
601: PITLVYYILL GL

Arabidopsis Description

PIN4Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178VZS2]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.