Factsheet for Os11t0137000-01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os12t0133800-01	Rice	peroxisome, plastid	54.87	99.02
TraesCS4D01G125300.1	Wheat	plasma membrane	89.53	87.63
TraesCS4B01G130100.1	Wheat	plasma membrane	89.17	87.28
TraesCS4A01G188100.1	Wheat	plasma membrane	89.17	86.97
EES09211	Sorghum	golgi, plasma membrane	85.02	80.79
Zm00001d052442_P001	Maize	plasma membrane	82.13	79.41
GSMUA_Achr8P09440_001	Banana	plasma membrane	73.83	74.91
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	74.01	73.61
KRH66749	Soybean	plasma membrane	76.17	70.69
PGSC0003DMT400021600	Potato	golgi, plasma membrane	73.47	68.52
Solyc10g078370.1.1	Tomato	golgi, plasma membrane	73.47	68.52
PGSC0003DMT400072459	Potato	golgi, plasma membrane	72.38	68.31
Solyc10g080880.1.1	Tomato	golgi, plasma membrane	72.02	68.09
KRG95082	Soybean	plasma membrane	57.58	66.32
Os06t0232300-01	Rice	plasma membrane	68.95	64.53
Os02t0743400-01	Rice	plasma membrane	68.77	64.03
HORVU4Hr1G026680.4	Barley	plastid	88.45	62.74
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	69.86	62.62
Os06t0660200-01	Rice	plasma membrane	64.8	56.98
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	57.94	54.31
Os01t0919800-01	Rice	plasma membrane	30.69	46.83
VIT_04s0023g00330.t01	Wine grape	extracellular, golgi	6.68	44.05
Os08t0529000-01	Rice	plasma membrane	29.24	43.78
Os01t0802700-01	Rice	plasma membrane	32.49	42.25
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	34.3	39.42
Os11t0122800-00	Rice	plasma membrane	16.79	31.42
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	21.48	28.74

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	EntrezGene:4349716	ProteinID:ABA91350.1	EMBL:AK103181	InterPro:Auxin_eff_plant
ProteinID:BAF27538.1	ProteinID:BAT12573.1	ncoils:Coil	ProteinID:EEE51610.1	ProteinID:FAA00677.1	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005634	GO:GO:0005730
GO:GO:0005732	GO:GO:0005737	GO:GO:0005783	GO:GO:0005886	GO:GO:0006139	GO:GO:0006364
GO:GO:0006810	GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0008152	GO:GO:0009719
GO:GO:0009734	GO:GO:0009926	GO:GO:0009987	GO:GO:0010252	GO:GO:0010315	GO:GO:0010329
GO:GO:0016020	GO:GO:0016021	GO:GO:0034457	GO:GO:0055085	InterPro:Mem_trans	EnsemblPlantsGene:Os11g0137000
EnsemblPlants:Os11t0137000-01	UniProt:P0C0X5	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946
TMHMM:TMhelix	UniParc:UPI0000668857	RefSeq:XP_015616014.1	SEG:seg	:	:

Description

PIN PROTEIN 1CSimilar to PIN1-like auxin transport protein. (Os11t0137000-01)

Coordinates

chr11:-:1702228..1705477

Molecular Weight (calculated)

59273.5 Da

IEP (calculated)

8.849

GRAVY (calculated)

0.401

Length

554 amino acids

Sequence
(BLAST)

001: MITVVDLYHV LTAVVPLYVA MTLAYASVRW WRIFSPDQCS GINRFVALFA VPLLSFHFIS TNNPFAMNLR FLAADTLQKL IVLALLALWC RLSARGSLDW
101: LITLFSLSTL PNTLVMGIPL LKGMYAAAAD VDSGSLMVQI VVLQCIIWYT LMLFLFEYRG ARLLVMEQFP DTAASIVSFR VDSDVVSLAG GGGGAAELQA
201: EAEVGDDGRM RVTVRKSTSS RSEAACSHGT QSHSQSMQPR VSNLSGVEIY SLQSSRNPTP RGSSFNHAEF FNIVGNGKQG DEEKGAAGGG GHSPQPVVGK
301: RKDLHMFVWS SSASPVSERA AAAAAGAVHV FGGGGADHGD AKGAQAYDEY SFGNKNEKDG PTLSKLGSNS TAQLRPKDDG EGMAAAMPPA SVMTRLILIM
401: VWRKLIRNPN TYSSLLGVIW SLVSYRWGIE MPAIIARSIS ILSDAGLGMA MFSLGLFMAL QPRIIACGNS LASYAMAVRF LVGPAVMAAA SIAVGLRGVL
501: LHIAIVQAAL PQGIVPFVFA KEYNVHPNIL STAVIFGMLI ALPITLVYYI LLGL

Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.