Factsheet for Os12t0133800-01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

plastid 2
mitochondrion 2
peroxisome 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os11t0137000-01	Rice	golgi, plasma membrane	99.02	54.87
TraesCS4D01G125300.1	Wheat	plasma membrane	91.21	49.47
TraesCS4B01G130100.1	Wheat	plasma membrane	90.55	49.12
TraesCS4A01G188100.1	Wheat	plasma membrane	90.55	48.94
KRG95082	Soybean	plasma membrane	73.94	47.19
EES09211	Sorghum	golgi, plasma membrane	87.3	45.97
Zm00001d052442_P001	Maize	plasma membrane	83.39	44.68
VIT_04s0023g00330.t01	Wine grape	extracellular, golgi	12.05	44.05
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	72.96	40.22
GSMUA_Achr8P09440_001	Banana	plasma membrane	71.34	40.11
KRH66749	Soybean	plasma membrane	76.87	39.53
PGSC0003DMT400021600	Potato	golgi, plasma membrane	72.96	37.71
Solyc10g078370.1.1	Tomato	golgi, plasma membrane	72.96	37.71
PGSC0003DMT400072459	Potato	golgi, plasma membrane	70.03	36.63
Solyc10g080880.1.1	Tomato	golgi, plasma membrane	69.71	36.52
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	71.01	35.28
HORVU4Hr1G026680.4	Barley	plastid	89.58	35.21
Os06t0232300-01	Rice	plasma membrane	66.45	34.46
Os02t0743400-01	Rice	plasma membrane	66.78	34.45
Os06t0660200-01	Rice	plasma membrane	61.24	29.84
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	55.37	28.76
Os01t0919800-01	Rice	plasma membrane	28.01	23.69
Os08t0529000-01	Rice	plasma membrane	28.01	23.24
Os01t0802700-01	Rice	plasma membrane	28.01	20.19
Os01t0715600-00	Rice	peroxisome, plasma membrane, plastid	31.27	19.92
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	26.06	19.32
Os11t0122800-00	Rice	plasma membrane	9.77	10.14

Protein Annotations

EnsemblPlants:Os12t0133800-01	EnsemblPlantsGene:Os12g0133800	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Auxin_eff_plant	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF14
PFAM:PF03547	SEG:seg	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI0000DD9D99	MapMan:11.2.4.1.1
MapMan:24.2.5.2.1	:	:	:	:	:

Description

PIN PROTEIN 1DSimilar to Auxin efflux carrier. (Os12t0133800-01)

Coordinates

chr12:-:1658206..1660462

Molecular Weight (calculated)

32306.4 Da

IEP (calculated)

9.944

GRAVY (calculated)

0.287

Length

307 amino acids

Sequence
(BLAST)

001: IYSLQSSRNP TPRGSSFNHA EFFNIVGNGK HGDEEKGAAG GGGHSPQPVV GKRKDLHMFV WSSSASPVSE RAAAAAAAGA VHVFGGGGAD HGDAKGAQAY
101: DEYSFGNKNE KDGPTLSKLG SNSTAQLRPK DDGEGRAAAM PPASVMTRLI LIMVWRKLIR NPNTYSSLLG VIWSLVSYRW GIEMPAIIAR SISILSDAGL
201: GMAMFSLGLF MALQPRIIAC GNSLASYAMA VRFLVGPAVM AAASIAVGLR GVLLHIAIVQ AALPQGIVPF VFAKEYNVHP NILSTAVIFG MLIALPITLV
301: YYILLGL

Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.