Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 6
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g078370.1.1 | Tomato | golgi, plasma membrane | 99.83 | 99.83 |
| PGSC0003DMT400072459 | Potato | golgi, plasma membrane | 85.52 | 86.54 |
| VIT_08s0040g01230.t01 | Wine grape | golgi, plasma membrane | 86.03 | 85.59 |
| VIT_08s0040g01220.t01 | Wine grape | plasma membrane | 84.85 | 84.14 |
| KRH66749 | Soybean | plasma membrane | 83.5 | 83.08 |
| KRG95082 | Soybean | plasma membrane | 63.64 | 78.59 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 71.89 | 78.21 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 72.22 | 77.02 |
| Os11t0137000-01 | Rice | golgi, plasma membrane | 68.52 | 73.47 |
| Os12t0133800-01 | Rice | peroxisome, plastid | 37.71 | 72.96 |
| TraesCS4D01G125300.1 | Wheat | plasma membrane | 67.51 | 70.85 |
| TraesCS4B01G130100.1 | Wheat | plasma membrane | 67.51 | 70.85 |
| TraesCS4A01G188100.1 | Wheat | plasma membrane | 67.68 | 70.77 |
| PGSC0003DMT400014752 | Potato | golgi, plasma membrane | 72.05 | 69.71 |
| EES09211 | Sorghum | golgi, plasma membrane | 66.16 | 67.41 |
| Zm00001d052442_P001 | Maize | plasma membrane | 63.13 | 65.44 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 68.01 | 61.77 |
| PGSC0003DMT400048251 | Potato | plasma membrane | 62.63 | 58.95 |
| PGSC0003DMT400015267 | Potato | cytosol | 44.61 | 57.11 |
| PGSC0003DMT400079013 | Potato | plasma membrane | 49.66 | 55.87 |
| PGSC0003DMT400003569 | Potato | plasma membrane | 23.57 | 53.85 |
| PGSC0003DMT400017300 | Potato | plasma membrane | 8.59 | 51.52 |
| HORVU4Hr1G026680.4 | Barley | plastid | 66.83 | 50.83 |
| PGSC0003DMT400046253 | Potato | plasma membrane | 27.1 | 45.35 |
| PGSC0003DMT400017301 | Potato | golgi, plasma membrane | 12.96 | 43.5 |
| HORVU3Hr1G111420.1 | Barley | mitochondrion, plastid | 28.79 | 39.77 |
| PGSC0003DMT400027309 | Potato | extracellular, plasma membrane, vacuole | 20.71 | 38.32 |
Protein Annotations
| EntrezGene:102591513 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | UniProt:M1AFE3 | InterPro:Mem_trans | PFAM:PF03547 |
| EnsemblPlantsGene:PGSC0003DMG400008379 | PGSC:PGSC0003DMG400008379 | EnsemblPlants:PGSC0003DMT400021600 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF14 | TIGRFAMs:TIGR00946 |
| TMHMM:TMhelix | UniParc:UPI000296F28C | RefSeq:XP_006362273.1 | : | : | : |
Description
Auxin efflux carrier [Source:PGSC_GENE;Acc:PGSC0003DMG400008379]
Coordinates
chr10:-:59284371..59287941
Molecular Weight (calculated)
64308.1 Da
IEP (calculated)
9.450
GRAVY (calculated)
0.194
Length
594 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLSDLYHV LTAVVPLYVA MILAYGSVKW WKIFSPDQCS GINRFVALFA VPLLSFHFIA SNNPYAMNYR FIAADTLQKI IVLFVLAIWS RVSSRGSLEW
101: SITLFSLSTL PNTLVMGIPL LKGMYGDASG SLMVQIVVLQ CIIWYTLMLF LFEYRGARML IAEQFPDTGG SIISFKVDSD IISLDGKEPL ETQAEVGDDG
201: KLHVTVRKST SSRSEIFSRR SHGPNSGLSL TPRPSNLTNA EIYSLQSSRN PTPRGSSFNH TDFYSMVNGK NANMSPRNSN FGNYGHDEES GVAGFGRGNG
301: VYGQGNAGYP APTNAGIFSP ATGPVTKKKA NGGTEGGKDL HMFVWSSSAS PVSEGGIHVF RGGGDYGNEL GVGAHPKDYD EFGREEFTFG NKQNLNGNDR
401: EGPVVRSSST TELRPKIAQE ETKATAMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGLTW SLVSFKWNVQ MPAIIAKSIS ILSDAGLGMA MFSLGLFMAL
501: SPRIIACGKT IALFSMGVRF LTGPAVMAAA SIAVGLRGVL LHIAIVQAAL PQGIVPFVFA KEYGVHPDIL STGVIFGMLV ALPITLVYYI LLGL
101: SITLFSLSTL PNTLVMGIPL LKGMYGDASG SLMVQIVVLQ CIIWYTLMLF LFEYRGARML IAEQFPDTGG SIISFKVDSD IISLDGKEPL ETQAEVGDDG
201: KLHVTVRKST SSRSEIFSRR SHGPNSGLSL TPRPSNLTNA EIYSLQSSRN PTPRGSSFNH TDFYSMVNGK NANMSPRNSN FGNYGHDEES GVAGFGRGNG
301: VYGQGNAGYP APTNAGIFSP ATGPVTKKKA NGGTEGGKDL HMFVWSSSAS PVSEGGIHVF RGGGDYGNEL GVGAHPKDYD EFGREEFTFG NKQNLNGNDR
401: EGPVVRSSST TELRPKIAQE ETKATAMPPA SVMTRLILIM VWRKLIRNPN TYSSLIGLTW SLVSFKWNVQ MPAIIAKSIS ILSDAGLGMA MFSLGLFMAL
501: SPRIIACGKT IALFSMGVRF LTGPAVMAAA SIAVGLRGVL LHIAIVQAAL PQGIVPFVFA KEYGVHPDIL STGVIFGMLV ALPITLVYYI LLGL
001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
Arabidopsis Description
PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.