Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plastid
Predictor Summary:
Predictor Summary:
- plastid 2
- mitochondrion 3
- golgi 1
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G091030.2 | Barley | golgi, plasma membrane, vacuole | 78.14 | 55.35 |
| HORVU1Hr1G072970.9 | Barley | golgi, plasma membrane, vacuole | 63.95 | 47.01 |
| HORVU3Hr1G057630.3 | Barley | plasma membrane | 44.65 | 32.11 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 37.91 | 29.85 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 41.4 | 29.62 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 37.67 | 29.08 |
| PGSC0003DMT400072459 | Potato | golgi, plasma membrane | 39.3 | 28.79 |
| PGSC0003DMT400021600 | Potato | golgi, plasma membrane | 39.77 | 28.79 |
| Solyc10g078370.1.1 | Tomato | golgi, plasma membrane | 39.77 | 28.79 |
| Solyc10g080880.1.1 | Tomato | golgi, plasma membrane | 38.84 | 28.5 |
| KRH66749 | Soybean | plasma membrane | 39.53 | 28.48 |
| HORVU7Hr1G110470.7 | Barley | golgi, plasma membrane, vacuole | 37.91 | 25.71 |
| KRG95082 | Soybean | plasma membrane | 26.51 | 23.7 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 18.6 | 22.41 |
| HORVU4Hr1G026680.4 | Barley | plastid | 37.21 | 20.49 |
| HORVU5Hr1G076120.2 | Barley | golgi, plasma membrane, vacuole | 12.56 | 20.0 |
| HORVU5Hr1G076210.1 | Barley | plasma membrane | 15.81 | 18.43 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 18.37 | 18.37 |
| HORVU3Hr1G094000.3 | Barley | plasma membrane | 15.12 | 16.97 |
| HORVU5Hr1G076060.2 | Barley | mitochondrion | 10.7 | 12.64 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 14.88 | 9.21 |
| VIT_04s0023g00330.t01 | Wine grape | extracellular, golgi | 0.0 | 0.0 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G111420.1 | EnsemblPlantsGene:HORVU3Hr1G111420 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF16 | PFAM:PF03547 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000B4894BA | UniProt:A0A287MPT5 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 |
Description
No Description!
Coordinates
chrchr3H:-:683347565..683349737
Molecular Weight (calculated)
46422.6 Da
IEP (calculated)
10.764
GRAVY (calculated)
-0.110
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MCITLNRLCA SRRRARRARR PPPPHHHRPL HRRRRPRRTP ATASSGSCQI NRFVAVFAVP LLSFKVIFGS NLYAMDLGFA AADTLQKLIV LAALAVWSRL
101: PLPFAGLDWS VTLFSLATLP NTLLMGIPLL VGMYGRHAGD LMVQLVVLQC IIWYTLLLFL FEFRAARLLI SGRFPAADVR VDPDVLSLDG SHAEAQAEVA
201: PDGSMHVVVR WSTAFVSRRS LLNGAAAGMS SPARGSNLTG MEIYSVSSSR NHTPRGSSSF THGDFSATTG GGGAPPTQPP QPHGVLRASS FGAADLFSLH
301: SSRQHTPRPS ASYDEHAPRG RSTTAVAPVD DPKDSMHMFD WSSGASEVSG LPVFRSGAKE SSRRRAPSEV PSIYSDSSRC TPAHQSLPTP CFSPVAQHAP
401: PLTTDLTCGS GLSEERLNEL KRAVTNLGSF
101: PLPFAGLDWS VTLFSLATLP NTLLMGIPLL VGMYGRHAGD LMVQLVVLQC IIWYTLLLFL FEFRAARLLI SGRFPAADVR VDPDVLSLDG SHAEAQAEVA
201: PDGSMHVVVR WSTAFVSRRS LLNGAAAGMS SPARGSNLTG MEIYSVSSSR NHTPRGSSSF THGDFSATTG GGGAPPTQPP QPHGVLRASS FGAADLFSLH
301: SSRQHTPRPS ASYDEHAPRG RSTTAVAPVD DPKDSMHMFD WSSGASEVSG LPVFRSGAKE SSRRRAPSEV PSIYSDSSRC TPAHQSLPTP CFSPVAQHAP
401: PLTTDLTCGS GLSEERLNEL KRAVTNLGSF
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.