Factsheet for HORVU4Hr1G026680.4

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

plastid 3
mitochondrion 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
TargetP:	plastid
YLoc:	plastid

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS4D01G125300.1	Wheat	plasma membrane	70.93	97.88
TraesCS4B01G130100.1	Wheat	plasma membrane	70.93	97.88
TraesCS4A01G188100.1	Wheat	plasma membrane	70.93	97.54
Os12t0133800-01	Rice	peroxisome, plastid	35.21	89.58
Os11t0137000-01	Rice	golgi, plasma membrane	62.74	88.45
EES09211	Sorghum	golgi, plasma membrane	61.33	82.16
Zm00001d052442_P001	Maize	plasma membrane	59.67	81.33
GSMUA_Achr8P09440_001	Banana	plasma membrane	50.58	72.34
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	50.58	70.92
KRH66749	Soybean	plasma membrane	51.86	67.84
Solyc10g078370.1.1	Tomato	golgi, plasma membrane	50.83	66.83
PGSC0003DMT400021600	Potato	golgi, plasma membrane	50.83	66.83
PGSC0003DMT400072459	Potato	golgi, plasma membrane	49.94	66.44
Solyc10g080880.1.1	Tomato	golgi, plasma membrane	49.81	66.38
KRG95082	Soybean	plasma membrane	39.18	63.62
HORVU3Hr1G057630.3	Barley	plasma membrane	45.84	59.87
HORVU6Hr1G076110.2	Barley	plasma membrane	44.05	57.24
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	44.94	55.36
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	40.08	53.5
HORVU3Hr1G067670.3	Barley	plasma membrane	24.07	52.66
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	40.46	52.06
HORVU3Hr1G094000.3	Barley	plasma membrane	22.02	44.91
HORVU5Hr1G076210.1	Barley	plasma membrane	20.87	44.17
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	21.77	39.53
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	20.49	37.21
HORVU5Hr1G076060.2	Barley	mitochondrion	14.72	31.59
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	10.88	31.48
HORVU7Hr1G038700.9	Barley	nucleus, plastid	19.46	21.87

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	UniProt:A0A287NMA4	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU4Hr1G026680	EnsemblPlants:HORVU4Hr1G026680.4	InterPro:Mem_trans
PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000B4792A0
SEG:seg	:	:	:	:	:

Description

Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A287NMA4]

Coordinates

chrchr4H:+:160183670..160187073

Molecular Weight (calculated)

84232.6 Da

IEP (calculated)

10.012

GRAVY (calculated)

0.188

Length

781 amino acids

Sequence
(BLAST)

001: RGRGRGRGRA LGTRPCTSMS PHTPPNASPF LVRHYANTMP LSSQPLRRSS SSYSQSYTYL PLFLPRTRKR IAPSTSSRTQ HSATDSDHSP ALLVRSALAP
101: CHAMLAPAAA AFCAPPLRRL PLPCPAPLAL ALALAPLFNF HHPRLLLVRL LHQACPSSLP HCLVLLDTHT HRRAVSHFFF LHPASWLDHH QATHRFFLDS
201: HCARSRVSRA PAAMITAADL YHVLTAVVPL YVAMTLAYGS VRWWRIFTPD QCSGINRFVA LFAVPLLSFH FISSNDPFAM NLRFLAADTL QKLAVLALLG
301: LWCRLRGGSL DWLITLFSLS TLPNTLVMGI PLLRGMYGPA SAGTLMVQIV VLQCIIWYTL MLFLFEYRGA KMLVMEQFPD TAADIVSFRV DSDVVSLAGG
401: GGADLQAEAD IGEDGRMRVT VRKSTSSRSE AACSHSHSHS HSQSMQPRVS NLSGVEIYSL QSSRNPTPRG SSFNHAEFFN IVGGAKGDEE KGSVGAGTGT
501: GTGGHSPQPL PQALAGKRKD LHMFVWSSSA SPVSERAAGG ALHVFGGGAD HGDVLAKGVQ AYDEYGRGGG DDFSFRNKNG GVANVDGPTL AKLGSNSTAQ
601: LHPKDDGEER AAAMPPASVM TRLILIMVWR KLIRNPNTYS SLIGVVWSLV SYRWGIEMPA IIAKSISILS DAGLGMAMFS LGLFMALQPR IIACGNKLAA
701: YAMAVRFLVG PAVMAAASLA VGLRGVLLHI AIVQAALPQG IVPFVFAKEY NVHPNILSTA YDLGMLIALP ITLVYYILLG L

Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.