Factsheet for HORVU6Hr1G076110.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS6A01G308600.1	Wheat	plasma membrane	91.85	93.88
TraesCS6D01G287800.1	Wheat	plasma membrane	91.35	93.21
Os02t0743400-01	Rice	plasma membrane	85.36	86.22
Zm00001d018024_P001	Maize	plasma membrane	84.86	85.71
EES05538	Sorghum	golgi, plasma membrane	85.36	84.79
Zm00001d052269_P001	Maize	plasma membrane	79.03	79.56
GSMUA_Achr7P07300_001	Banana	golgi, plasma membrane	68.39	72.23
TraesCS6B01G337300.3	Wheat	plasma membrane	69.88	70.59
GSMUA_Achr9P27160_001	Banana	plasma membrane	62.56	68.24
HORVU3Hr1G057630.3	Barley	plasma membrane	57.74	58.03
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	54.91	52.05
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	51.25	50.74
HORVU3Hr1G067670.3	Barley	plasma membrane	29.62	49.86
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	48.42	49.74
HORVU4Hr1G026680.4	Barley	plastid	57.24	44.05
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	29.62	41.4
HORVU3Hr1G094000.3	Barley	plasma membrane	24.79	38.9
HORVU5Hr1G076210.1	Barley	plasma membrane	23.29	37.94
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	26.62	37.21
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	12.98	28.89
HORVU5Hr1G076060.2	Barley	mitochondrion	16.64	27.47
HORVU7Hr1G038700.9	Barley	nucleus, plastid	25.79	22.3

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	UniProt:A0A287UR38	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU6Hr1G076110	EnsemblPlants:HORVU6Hr1G076110.2	InterPro:Mem_trans
PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF19	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000B463F10
SEG:seg	:	:	:	:	:

Description

Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A287UR38]

Coordinates

chrchr6H:-:524080751..524083660

Molecular Weight (calculated)

65137.0 Da

IEP (calculated)

9.194

GRAVY (calculated)

0.101

Length

601 amino acids

Sequence
(BLAST)

001: MITGTDFYHV MTAVVPLYVA MILAYGSVKW WGIFTPDQCS GINRFVALFA VPLLSFHFIS TNNPYTMNLR FIAADTLQKL MMLAMLTAWS HLSRRGSLEW
101: TITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARML ITEQFPDTAG AIASIVVDPD VVSLDGRSNA IETEAEVKED
201: GKIHVTVRRS SASRSDIYSR RSMGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMVGRSSN FGAADAYGIR TGATPRPSNY EEDAPKPKHP
301: APGAGHYPAP NPAVAAAPKG PKKPAANGQA KGEDLHMFVW SSSASPVSDV FGGGAPDYND AAAAKSPRKM DGAKEREDYN VERDDFSFGN RGALDRDAEA
401: GDEKAMTADP NNAMSAGPTA MPPTSVMTRL ILIMVWRKLI RNPNTYSSLI GLIWSLVCFR WNFTMPAIVL GSISILSDAG LGMAMFSLGL FMALQPRIIA
501: CGNKVATYAM AVRFLAGPAV MTAASFAVGL RGTLLHVAIV QVLACLALVS TIEPRGVKTE KQGGINKERK GSVCPCPFFS PVASPLVLLL SRPTFFGPPF
601: L

Best Arabidopsis Sequence Match ( AT1G23080.3 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.