Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6D01G287800.1 | Wheat | plasma membrane | 70.59 | 71.31 |
| TraesCS6A01G308600.1 | Wheat | plasma membrane | 70.42 | 71.26 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 70.59 | 69.88 |
| Zm00001d018024_P001 | Maize | plasma membrane | 67.39 | 67.39 |
| Os02t0743400-01 | Rice | plasma membrane | 67.23 | 67.23 |
| EES05538 | Sorghum | golgi, plasma membrane | 67.39 | 66.28 |
| TraesCS7B01G095500.1 | Wheat | plasma membrane | 64.03 | 65.02 |
| Zm00001d052269_P001 | Maize | plasma membrane | 63.36 | 63.15 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 58.15 | 60.81 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 51.6 | 55.72 |
| TraesCS4B01G130100.1 | Wheat | plasma membrane | 48.57 | 51.06 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 48.91 | 47.78 |
| TraesCS7B01G398100.1 | Wheat | golgi, plasma membrane, vacuole | 47.23 | 44.46 |
| TraesCS1B01G445400.1 | Wheat | golgi, plasma membrane, vacuole | 42.86 | 42.71 |
| TraesCS3B01G276500.1 | Wheat | plasma membrane | 22.52 | 37.53 |
| TraesCS5B01G283500.1 | Wheat | extracellular, plasma membrane, vacuole | 20.17 | 32.61 |
| TraesCS5B01G283600.1 | Wheat | plasma membrane | 19.83 | 32.42 |
| TraesCS7B01G359200.1 | Wheat | plasma membrane | 21.01 | 31.81 |
| TraesCS3B01G462900.1 | Wheat | plasma membrane | 19.16 | 30.98 |
| TraesCS7B01G359300.1 | Wheat | plasma membrane, vacuole | 20.67 | 30.83 |
| TraesCS7B01G331500.1 | Wheat | cytosol, plasma membrane, vacuole | 21.01 | 30.79 |
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 22.02 | 30.61 |
| TraesCS5B01G284900.1 | Wheat | golgi, plasma membrane, vacuole | 17.98 | 28.38 |
| TraesCS5B01G285000.1 | Wheat | plasma membrane | 17.82 | 27.39 |
Protein Annotations
| EnsemblPlants:TraesCS6B01G337300.3 | EnsemblPlantsGene:TraesCS6B01G337300 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Auxin_eff_plant | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF19 |
| PFAM:PF03547 | SEG:seg | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 |
Description
No Description!
Coordinates
chr6B:+:593711934..593714321
Molecular Weight (calculated)
65320.2 Da
IEP (calculated)
10.308
GRAVY (calculated)
-0.345
Length
595 amino acids
Sequence
(BLAST)
(BLAST)
001: MITGTDFYHV MTAVVPLYVA MILAYGSVKW WGIFTPDQCS GINRFVALFA VPLLSFHFIS TNNPYTMNLR FIAADTLQKL MMLAMLTAWS HLSRRGSLEW
101: TITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARML ITEQFPDTAG AIASIVVDPD VVSLDGRSNA IETEAEVKED
201: GKIHVTVRRS SASRSDIYSR RSMGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMVGRSSN FGAADAYGIR TGATPRPSNY EEDAPKPKHP
301: APGAGHYPAP NPAVAAAPKG PKKPATNGQA KGEDLHMFVW SSSASPVSDV FGGGAPDYND AAAAKSPRKM DGAKEREDYN VERDDFSFGN RGALDRDTEA
401: GDEKAMTADP NNAMSAGQTA MPPTSVMTRL ILIMVWRKLI RNPNTYSSLI GLIWSLVCFR SVELHDAGNR PGIHLHPVGC GARNGHVQPR SVHGAAAADH
501: RVREQGGDVR HGGAVPRRAG RHDRRLLRRG PPRHAPARRH RPGRAAAGHC PLRLRQGVQC APRHPQHSGH IRHAHRPAHH ARLLHPARPV SERHM
101: TITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARML ITEQFPDTAG AIASIVVDPD VVSLDGRSNA IETEAEVKED
201: GKIHVTVRRS SASRSDIYSR RSMGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMVGRSSN FGAADAYGIR TGATPRPSNY EEDAPKPKHP
301: APGAGHYPAP NPAVAAAPKG PKKPATNGQA KGEDLHMFVW SSSASPVSDV FGGGAPDYND AAAAKSPRKM DGAKEREDYN VERDDFSFGN RGALDRDTEA
401: GDEKAMTADP NNAMSAGQTA MPPTSVMTRL ILIMVWRKLI RNPNTYSSLI GLIWSLVCFR SVELHDAGNR PGIHLHPVGC GARNGHVQPR SVHGAAAADH
501: RVREQGGDVR HGGAVPRRAG RHDRRLLRRG PPRHAPARRH RPGRAAAGHC PLRLRQGVQC APRHPQHSGH IRHAHRPAHH ARLLHPARPV SERHM
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.