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Banana
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Banana
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, golgi

Predictor Summary:
  • nucleus 1
  • extracellular 4
  • endoplasmic reticulum 4
  • vacuole 4
  • plasma membrane 5
  • golgi 5
  • cytosol 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:golgi, plasma membrane
Any Predictor:cytosol, nucleus, plastid, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:golgi
Plant-mPloc:cytosol
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:plastid
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
GSMUA_Achr9P27160_001 Banana plasma membrane 76.63 79.13
TraesCS6A01G308600.1 Wheat plasma membrane 77.86 75.34
TraesCS6D01G287800.1 Wheat plasma membrane 77.86 75.21
Zm00001d018024_P001 Maize plasma membrane 78.38 74.96
GSMUA_Achr3P07280_001 Banana plasma membrane 76.98 74.87
Os06t0232300-01 Rice plasma membrane 77.5 74.49
EES05538 Sorghum golgi, plasma membrane 79.09 74.38
Os02t0743400-01 Rice plasma membrane 77.68 74.29
Zm00001d044812_P001 Maize plasma membrane 78.03 73.88
GSMUA_Achr8P23120_001 Banana plasma membrane 65.38 73.81
TraesCS7D01G191600.1 Wheat plasma membrane 75.92 73.72
TraesCS7B01G095500.1 Wheat plasma membrane 75.92 73.72
TraesCS7A01G190600.1 Wheat plasma membrane 75.92 73.59
EER88128 Sorghum golgi, plasma membrane 78.21 73.43
Zm00001d052269_P001 Maize plasma membrane 76.63 73.03
GSMUA_Achr8P09440_001 Banana plasma membrane 68.19 71.06
HORVU6Hr1G076110.2 Barley plasma membrane 72.23 68.39
GSMUA_Achr2P00910_001 Banana golgi, plasma membrane, vacuole 66.43 67.86
GSMUA_Achr9P15520_001 Banana plasma membrane 47.1 67.51
GSMUA_Achr8P29780_001 Banana golgi, plasma membrane, vacuole 55.89 65.7
GSMUA_Achr1P25190_001 Banana golgi, plasma membrane, vacuole 68.01 63.76
GSMUA_Achr7P17140_001 Banana plasma membrane 65.2 63.75
GSMUA_Achr1P15720_001 Banana plasma membrane 57.29 63.55
TraesCS6B01G337300.3 Wheat plasma membrane 60.81 58.15
GSMUA_Achr4P00310_001 Banana golgi, plasma membrane, vacuole 30.58 56.68
GSMUA_Achr3P22010_001 Banana plasma membrane 48.15 54.04
GSMUA_AchrUn_... Banana golgi, plasma membrane, vacuole 32.51 50.68
GSMUA_Achr8P08300_001 Banana plasma membrane 50.44 50.17
GSMUA_Achr11P... Banana extracellular, plasma membrane, vacuole 28.12 49.84
GSMUA_Achr11P... Banana golgi, plasma membrane, vacuole 28.3 49.54
GSMUA_Achr5P25220_001 Banana golgi, plasma membrane, vacuole 27.94 48.77
GSMUA_Achr5P25210_001 Banana extracellular, golgi, vacuole 27.59 48.16
GSMUA_Achr5P25200_001 Banana cytosol, extracellular, plasma membrane 9.14 33.12
Protein Annotations
MapMan:11.2.4.1.1MapMan:24.2.5.2.1InterPro:Auxin_eff_plantGO:GO:0005575GO:GO:0006810GO:GO:0007154
GO:GO:0007165GO:GO:0008150GO:GO:0009719GO:GO:0009734GO:GO:0009987GO:GO:0016020
GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSMUA_Achr7G07300_001EnsemblPlants:GSMUA_Achr7P07300_001EnsemblPlants:GSMUA_Achr7T07300_001UniProt:M0TFH0
InterPro:Mem_transPFAM:PF03547PANTHER:PTHR31752PANTHER:PTHR31752:SF14TIGRFAMs:TIGR00946TMHMM:TMhelix
UniParc:UPI000294B4CESEG:seg::::
Description
Auxin efflux carrier component 1 [Source:GMGC_GENE;Acc:GSMUA_Achr7G07300_001]
Coordinates
chr7:+:5384621..5386918
Molecular Weight (calculated)
62726.7 Da
IEP (calculated)
8.996
GRAVY (calculated)
0.248
Length
569 amino acids
Sequence
(BLAST)
001: MITLGDFYNV MTAVVPLYVA MILAYGSVKW WKIFTPLQCS GINRFVALFA VPLLSFHFIS GNNPYTMNLR FIAADTLQKL MVLAALTAWG CLSRRGRLDW
101: TITTFSLSTL PNTLVMGIPL LRGMYGEVSH SLMVQIVVLQ CIIWYTLMLF LFEYRAAKLL IAEQFPDTAG AIASISVDSD VVSLDGREML ETETQIKEDG
201: KLHVTVRRSN ASRSDIHSRR SLGFSATTPR PSNLTNAEIY SLQSSRNPTP RGSSFNHNDF YNMVGRSSNF GAADPRFQYQ LPVTTTAAAP HYPAPNPADG
301: GAKDLHMFVW SSSASPVSEA FGNSKEYGLP ATEASGLKEL RSMNLIWFTV DGWKDGRDDY LEREEFSFAN KATMDKEGAP QEGDEKANNE ANKGGLREVK
401: AMPPTSVMTR LILIMVWRKL IRNPNTYSSL IGLIWSLVCF RWNFQMPAIV LRSISILSDA GLGMAMFSLG LFMALQPRII ACGNKAAAFA MAVRFLTGPA
501: VMAAASLVVG LRGVLLHIAI VQAALPQGIV PFVFAKEYNV HPDILSTAVI FGMLIALPIT LVYYILMGI
Best Arabidopsis Sequence Match ( AT1G73590.1 )
(BLAST)
001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
Arabidopsis Description
PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.