Factsheet for GSMUA_Achr5P25220_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

nucleus 1
extracellular 2
endoplasmic reticulum 2
vacuole 3
plasma membrane 4
golgi 3

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr5P25210_001	Banana	extracellular, golgi, vacuole	91.41	91.41
GSMUA_Achr11P...	Banana	golgi, plasma membrane, vacuole	69.02	69.23
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	67.79	68.85
GSMUA_Achr5P25200_001	Banana	cytosol, extracellular, plasma membrane	22.09	45.86
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	39.57	42.02
GSMUA_Achr9P15520_001	Banana	plasma membrane	46.93	38.54
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	39.26	35.07
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	49.08	33.06
GSMUA_Achr8P23120_001	Banana	plasma membrane	49.08	31.75
GSMUA_Achr3P22010_001	Banana	plasma membrane	47.55	30.57
GSMUA_Achr1P15720_001	Banana	plasma membrane	47.55	30.21
GSMUA_Achr8P09440_001	Banana	plasma membrane	48.77	29.12
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	49.08	28.73
GSMUA_Achr7P17140_001	Banana	plasma membrane	51.23	28.69
GSMUA_Achr9P27160_001	Banana	plasma membrane	48.16	28.49
GSMUA_Achr3P07280_001	Banana	plasma membrane	50.31	28.03
GSMUA_Achr7P07300_001	Banana	golgi, plasma membrane	48.77	27.94
GSMUA_Achr8P08300_001	Banana	plasma membrane	47.85	27.27
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	49.69	26.69

Protein Annotations

EnsemblPlants:GSMUA_Achr5P25220_001	EnsemblPlants:GSMUA_Achr5T25220_001	EnsemblPlantsGene:GSMUA_Achr5G25220_001	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF2
PFAM:PF03547	SEG:seg	TMHMM:TMhelix	UniParc:UPI000296DC0B	UniProt:M0T1J7	MapMan:11.2.4.1.1
MapMan:24.2.5.2.1	:	:	:	:	:

Description

Putative auxin efflux carrier component 8 [Source:GMGC_GENE;Acc:GSMUA_Achr5G25220_001]

Coordinates

chr5:+:26312798..26314192

Molecular Weight (calculated)

35654.2 Da

IEP (calculated)

8.435

GRAVY (calculated)

0.686

Length

326 amino acids

Sequence
(BLAST)

001: MIEGRDVLKV IEAMTPLYVA LGLGYGSVRW WHVFTREQCE AINRLVVYFA IPFFTFDFTS HINPFTMNYR VIAADAISKL LTVAVLAAWT WCSSSDKSSY
101: SWAITIFSLS QLSNILVVGA PLLDAMYGRW AQDIIVQLSV MVAPEPQQAM DVERNADVAA RPTLGSLMKT VWLKLVINPN IYASVLGVIW ALIANRWHFE
201: MPRIIEGSVL VMSKTGTGMS MFSMGLFMAL QDKIVACGPK LSAFGMVLKF IAGPAATAIS AVSVGLRGDL LRVAIIQAAL PQSISSFIFA REYGLHPGVL
301: STAVIFGTLV SLPVLIAYYE VLGLLS

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.