Factsheet for GSMUA_Achr9P15520_001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	golgi
Plant-mPloc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P23120_001	Banana	plasma membrane	69.27	54.56
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	41.81	54.07
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	63.22	51.86
GSMUA_Achr9P27160_001	Banana	plasma membrane	67.51	48.64
GSMUA_Achr11P...	Banana	extracellular, plasma membrane, vacuole	39.04	48.29
GSMUA_Achr3P07280_001	Banana	plasma membrane	70.78	48.03
GSMUA_Achr8P09440_001	Banana	plasma membrane	66.0	47.99
GSMUA_Achr11P...	Banana	golgi, plasma membrane, vacuole	39.04	47.69
GSMUA_Achr2P00910_001	Banana	golgi, plasma membrane, vacuole	66.75	47.58
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	43.32	47.12
GSMUA_Achr7P07300_001	Banana	golgi, plasma membrane	67.51	47.1
GSMUA_Achr5P25220_001	Banana	golgi, plasma membrane, vacuole	38.54	46.93
GSMUA_Achr1P15720_001	Banana	plasma membrane	59.95	46.39
GSMUA_Achr5P25210_001	Banana	extracellular, golgi, vacuole	38.04	46.32
GSMUA_Achr3P22010_001	Banana	plasma membrane	58.94	46.15
GSMUA_Achr7P17140_001	Banana	plasma membrane	66.0	45.02
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	67.0	43.82
GSMUA_Achr8P08300_001	Banana	plasma membrane	60.96	42.31
GSMUA_Achr5P25200_001	Banana	cytosol, extracellular, plasma membrane	12.34	31.21

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810	GO:GO:0007154
GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:GSMUA_Achr9G15520_001	EnsemblPlants:GSMUA_Achr9P15520_001	EnsemblPlants:GSMUA_Achr9T15520_001	UniProt:M0U0L0
InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF14	TIGRFAMs:TIGR00946	TMHMM:TMhelix
UniParc:UPI000295468F	SEG:seg	:	:	:	:

Description

Putative auxin efflux carrier component 8 [Source:GMGC_GENE;Acc:GSMUA_Achr9G15520_001]

Coordinates

chr9:-:10231258..10233233

Molecular Weight (calculated)

43588.9 Da

IEP (calculated)

8.408

GRAVY (calculated)

0.799

Length

397 amino acids

Sequence
(BLAST)

001: MITGTDFYHV MTGMVPLYVA MILAYLSVKW WKIFTPEQCA GINRFVALFA VPLLSFHFIA GNDPYKMNYR FIGADTLSKV IVLVILAVWS NLSRRMSLDW
101: TITIFSLATL PNTLVMGIPL LEGMYGEYSG SLMVQIVVLQ CIIWYTLMLL LLEYRAGRLL IAEKSSFSVV FPVAGPSEIQ EIRVEVPPRQ STNRPLTTFL
201: ENQESGPQDG DVMVQEPAIG ALTIVPTTMP PASVMAKLIL VVVWRKLIRN PNNYASLIGL AWSLVSYKLH VNMPVIVAKS ISIMSDTGLG MAMFSLGLFM
301: GLQPRVIACG NLAAAIAMAI RFLAGPAFMA IASFAVGIRG ELLRIAIVQA ALPQGIVPFV FAEEYNLHAE ILSTAVIFGM IIALPITLVY YVIVGLV

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.