Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- plastid 1
- mitochondrion 1
- golgi 3
- plasma membrane 4
- extracellular 2
- endoplasmic reticulum 2
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 75.24 | 63.29 |
| TraesCS7B01G331500.1 | Wheat | cytosol, plasma membrane, vacuole | 59.61 | 45.07 |
| TraesCS3D01G324800.1 | Wheat | plasma membrane | 63.19 | 45.01 |
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 62.54 | 44.86 |
| TraesCS3A01G331300.1 | Wheat | plasma membrane | 62.54 | 44.44 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 62.22 | 44.42 |
| TraesCS7B01G359300.1 | Wheat | plasma membrane, vacuole | 57.33 | 44.11 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 63.19 | 43.69 |
| Os01t0802700-01 | Rice | plasma membrane | 60.26 | 43.43 |
| Zm00001d043179_P001 | Maize | plasma membrane | 62.22 | 42.73 |
| TraesCS7B01G359200.1 | Wheat | plasma membrane | 54.4 | 42.49 |
| GSMUA_Achr9P15520_001 | Banana | plasma membrane | 54.07 | 41.81 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 43.65 | 41.74 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane, vacuole | 43.65 | 41.23 |
| GSMUA_Achr5P25220_001 | Banana | golgi, plasma membrane, vacuole | 42.02 | 39.57 |
| TraesCS7D01G446900.1 | Wheat | plasma membrane | 36.48 | 39.3 |
| GSMUA_Achr5P25210_001 | Banana | extracellular, golgi, vacuole | 41.37 | 38.96 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 57.33 | 36.36 |
| GSMUA_Achr8P23120_001 | Banana | plasma membrane | 57.98 | 35.32 |
| GSMUA_Achr1P15720_001 | Banana | plasma membrane | 57.0 | 34.11 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 57.98 | 32.6 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 58.96 | 32.5 |
| GSMUA_Achr3P22010_001 | Banana | plasma membrane | 53.09 | 32.15 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 56.03 | 31.22 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 58.63 | 30.93 |
| GSMUA_Achr3P07280_001 | Banana | plasma membrane | 58.31 | 30.6 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 56.68 | 30.58 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 58.31 | 29.49 |
| GSMUA_Achr8P08300_001 | Banana | plasma membrane | 53.75 | 28.85 |
| GSMUA_Achr5P25200_001 | Banana | cytosol, extracellular, plasma membrane | 13.03 | 25.48 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009987 | GO:GO:0010315 |
| GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr4G00310_001 | EnsemblPlants:GSMUA_Achr4P00310_001 |
| EnsemblPlants:GSMUA_Achr4T00310_001 | UniProt:M0SJU8 | InterPro:Mem_trans | PFAM:PF03547 | InterPro:PIN2 | PANTHER:PTHR31752 |
| PANTHER:PTHR31752:SF4 | TMHMM:TMhelix | UniParc:UPI000296F577 | SEG:seg | : | : |
Description
Putative auxin efflux carrier component 5 [Source:GMGC_GENE;Acc:GSMUA_Achr4G00310_001]
Coordinates
chr4:+:262492..264289
Molecular Weight (calculated)
33148.6 Da
IEP (calculated)
9.020
GRAVY (calculated)
0.994
Length
307 amino acids
Sequence
(BLAST)
(BLAST)
001: MISKSSLYHV VESMAPLYVA MGLGYASVRF RAFTPEQCAG INHFVALFAM PLLIFRMISS NDPYAMNLRF IAADTIQKAA ILAALALWAR LSARGSLAWV
101: VTLFSLATLP NTIIMGVPIL RGMYGSMSGT LMVQIVVLQF AFWYVLVVFL FEYMAAQRAL IPSIHASMLG LVWSFIAYRE GIKLPTIIDD SVAIISVSAT
201: GLATFSVGTF MAQQSRFISC GCSVASLAMA MRFLVGPAVM AASSLAVGLH GDLLHVGIVQ AALPLAVISF VYAKEYNVHP EIMSTGVIVG TFASFPITII
301: YYILLGL
101: VTLFSLATLP NTIIMGVPIL RGMYGSMSGT LMVQIVVLQF AFWYVLVVFL FEYMAAQRAL IPSIHASMLG LVWSFIAYRE GIKLPTIIDD SVAIISVSAT
201: GLATFSVGTF MAQQSRFISC GCSVASLAMA MRFLVGPAVM AASSLAVGLH GDLLHVGIVQ AALPLAVISF VYAKEYNVHP EIMSTGVIVG TFASFPITII
301: YYILLGL
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.