Factsheet for TraesCS7B01G359300.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane, vacuole
Any Predictor:	peroxisome, secretory
iPSORT:	secretory
MultiLoc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7D01G446900.1	Wheat	plasma membrane	63.91	89.47
TraesCS7B01G331500.1	Wheat	cytosol, plasma membrane, vacuole	73.93	72.66
TraesCS7B01G359200.1	Wheat	plasma membrane	71.43	72.52
TraesCS3B01G361500.1	Wheat	plasma membrane	74.19	69.16
Os01t0802700-01	Rice	plasma membrane	67.92	63.62
EES03766	Sorghum	golgi, plasma membrane, vacuole	67.42	60.59
Zm00001d043179_P001	Maize	plasma membrane	66.67	59.51
GSMUA_Achr4P00310_001	Banana	golgi, plasma membrane, vacuole	44.11	57.33
GSMUA_AchrUn_...	Banana	golgi, plasma membrane, vacuole	48.87	53.42
TraesCS3B01G276500.1	Wheat	plasma membrane	35.34	39.5
TraesCS5B01G283500.1	Wheat	extracellular, plasma membrane, vacuole	36.34	39.4
TraesCS5B01G283600.1	Wheat	plasma membrane	35.09	38.46
TraesCS3B01G462900.1	Wheat	plasma membrane	32.58	35.33
TraesCS5B01G284900.1	Wheat	golgi, plasma membrane, vacuole	31.08	32.89
TraesCS5B01G285000.1	Wheat	plasma membrane	30.83	31.78
TraesCS4B01G130100.1	Wheat	plasma membrane	42.11	29.68
TraesCS7B01G095500.1	Wheat	plasma membrane	43.11	29.35
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	39.35	26.3
TraesCS7B01G398100.1	Wheat	golgi, plasma membrane, vacuole	40.6	25.63
TraesCS3B01G260700.1	Wheat	plasma membrane	35.34	23.15
TraesCS6B01G337300.3	Wheat	plasma membrane	30.83	20.67

Protein Annotations

EnsemblPlants:TraesCS7B01G359300.1	EnsemblPlantsGene:TraesCS7B01G359300	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Auxin_eff_plant	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF9
PFAM:PF03547	SEG:seg	TIGRFAMs:TIGR00946	TMHMM:TMhelix	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1

Description

No Description!

Coordinates

chr7B:-:621396199..621404351

Molecular Weight (calculated)

42838.1 Da

IEP (calculated)

8.535

GRAVY (calculated)

0.595

Length

399 amino acids

Sequence
(BLAST)

001: MITGSAVYQV VEAMAPLYTA AALGYASVRW LKAFSEEQCA GINRFVATYA MPALIFDMVS TNDPYAMNGR LVAADTLQKG FMLLGLVAWA AWSSPRRRDT
101: SAGNGKVAAS PLQWVVTAFS MAQLPSTIVM GVPLLGALYG PTSKDLMKQI VVMQLCVWYN VVIFMYEYMA AKDGSTKVGP APASPENVES TEVQAAQQGM
201: AAASQTTSTA VVGEASPTHG ADAEVAEAED VALPPPPSMS HVAFVTGKKV LKIPNTYATF LGLFWALIAF KCRIKMPKII VDSLFTIQTT TVGLSMFSSG
301: TFMARQPRFI PCGYVIALVS MILKFLIGPM AMLLASFAIG MQGTLLRIAV IQAALPLSVI SFVYAKEYKV HADIMSTGVI LGIFILLPVT IVYYILLEL

Best Arabidopsis Sequence Match ( AT2G01420.3 )
(BLAST)

001: MITWHDLYTV LTAVVPLYVA MILAYGSVQW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNDPYAMNFR FVAADTLQKI IMLVLLALWA NLTKNGSLEW
101: MITIFSLSTL PNTLVMGIPL LIAMYGTYAG SLMVQVVVLQ CIIWYTLLLF LFEYRGAKLL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAEIGNDG
201: KLHVTVRKSN ASRRSLMMTP RPSNLTGAEI YSLSSTPRGS NFNHSDFYSV MGFPGGRLSN FGPADLYSVQ SSRGPTPRPS NFEENNAVKY GFYNNTNSSV
301: PAAGSYPAPN PEFSTGTGVS TKPNKIPKEN QQQLQEKDSK ASHDAKELHM FVWSSSASPV SDVFGGGAGD NVATEQSEQG AKEIRMVVSD QPRKSNARGG
401: GDDIGGLDSG EGEREIEKAT AGLNKMGSNS TAELEAAGGD GGGNNGTHMP PTSVMTRLIL IMVWRKLIRN PNTYSSLIGL IWALVAYRWH VAMPKILQQS
501: ISILSDAGLG MAMFSLGKH

Arabidopsis Description

PIN4Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178VZS2]
SUBAcon: [plasma membrane,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.