Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 2
- endoplasmic reticulum 2
- vacuole 2
- plasma membrane 4
- golgi 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 80.76 | 81.31 |
| Os01t0802700-01 | Rice | plasma membrane | 68.46 | 71.83 |
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 68.68 | 71.73 |
| TraesCS3A01G331300.1 | Wheat | plasma membrane | 68.9 | 71.3 |
| TraesCS3D01G324800.1 | Wheat | plasma membrane | 68.46 | 71.0 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 67.34 | 70.0 |
| TraesCS7B01G359300.1 | Wheat | plasma membrane, vacuole | 59.51 | 66.67 |
| TraesCS7B01G331500.1 | Wheat | cytosol, plasma membrane, vacuole | 59.28 | 65.27 |
| TraesCS7B01G359200.1 | Wheat | plasma membrane | 55.7 | 63.36 |
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 42.73 | 62.22 |
| TraesCS7D01G446900.1 | Wheat | plasma membrane | 39.15 | 61.4 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 46.31 | 56.71 |
| Zm00001d043660_P001 | Maize | plasma membrane | 31.99 | 39.5 |
| Zm00001d006082_P001 | Maize | extracellular, plasma membrane, vacuole | 30.65 | 37.53 |
| Zm00001d042345_P001 | Maize | plasma membrane | 28.64 | 33.51 |
| Zm00001d031594_P001 | Maize | plasma membrane | 31.1 | 31.81 |
| Zm00001d018024_P001 | Maize | plasma membrane | 42.28 | 31.76 |
| Zm00001d052269_P001 | Maize | plasma membrane | 42.06 | 31.49 |
| Zm00001d044812_P001 | Maize | plasma membrane | 42.28 | 31.45 |
| Zm00001d044083_P001 | Maize | plasma membrane | 40.94 | 30.0 |
| Zm00001d045219_P001 | Maize | plasma membrane | 38.93 | 29.95 |
| Zm00001d052442_P001 | Maize | plasma membrane | 36.91 | 28.8 |
| Zm00001d046893_P001 | Maize | golgi, plasma membrane, vacuole | 38.26 | 26.89 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | UniProt:A0A1D6N9F1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | ProteinID:ONM37172.1 | PFAM:PF03547 |
| PANTHER:PTHR31752 | PANTHER:PTHR31752:SF9 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI00084304A9 | EnsemblPlantsGene:Zm00001d043179 |
| EnsemblPlants:Zm00001d043179_P001 | EnsemblPlants:Zm00001d043179_T001 | SEG:seg | : | : | : |
Description
PIN-formed protein9 PIN-formed protein9
Coordinates
chr3:+:190701685..190704770
Molecular Weight (calculated)
48316.5 Da
IEP (calculated)
8.132
GRAVY (calculated)
0.534
Length
447 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPGSAVYHV VEAMAPLYTS AVLGYASVRW LKAFSDEQCA GINHFVALYA VPVLIFHMVS TNDPYHMNER LIAADTLQKA VVLLALTAWA FWSHLSRRRG
101: GRGKRQVVQG AESPIKWVVT NFSVASLPNT IIMGVPLLDG MYGPVSGGLM KQIVVMQFCI WYNVVIFLYE FMAARDGSAR ISPAVPATAG ERVVDDENGG
201: SSSVHRHAAA DRSHHHHQVV VNIEITEVAP APAAEAVVAS SLMPAAATKE MSPEDDGDAN KQVVVAVDVQ PPVMHVVWMA TKKLLQIPNT YASFLGLIWS
301: LMAFKIGFSM PKIVSDSLFI IYTTAVGLSM FASGTFIARQ SRFVPCGYTV ASLSMLLKFL IGPVIMLIAS LAIGMHGTLL HIAVVQASRP TAPNNAALPL
401: AVTSFVYAEE YKVHADIMST GSVPFKVILG IFISLPVTIV YYILLGL
101: GRGKRQVVQG AESPIKWVVT NFSVASLPNT IIMGVPLLDG MYGPVSGGLM KQIVVMQFCI WYNVVIFLYE FMAARDGSAR ISPAVPATAG ERVVDDENGG
201: SSSVHRHAAA DRSHHHHQVV VNIEITEVAP APAAEAVVAS SLMPAAATKE MSPEDDGDAN KQVVVAVDVQ PPVMHVVWMA TKKLLQIPNT YASFLGLIWS
301: LMAFKIGFSM PKIVSDSLFI IYTTAVGLSM FASGTFIARQ SRFVPCGYTV ASLSMLLKFL IGPVIMLIAS LAIGMHGTLL HIAVVQASRP TAPNNAALPL
401: AVTSFVYAEE YKVHADIMST GSVPFKVILG IFISLPVTIV YYILLGL
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.