Factsheet for Zm00001d031594_P001

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 5
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	mitochondrion, secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0529000-01	Rice	plasma membrane	59.5	70.27
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	57.44	68.39
TraesCS7D01G259700.1	Wheat	plasma membrane, vacuole	57.67	66.32
PGSC0003DMT400017300	Potato	plasma membrane	14.42	63.64
OQU80833	Sorghum	extracellular	43.25	63.21
Zm00001d006082_P001	Maize	extracellular, plasma membrane, vacuole	47.14	56.44
Zm00001d042345_P001	Maize	plasma membrane	43.02	49.21
PGSC0003DMT400046253	Potato	plasma membrane	39.13	48.17
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	38.67	47.21
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	37.53	45.43
PGSC0003DMT400017301	Potato	golgi, plasma membrane	18.08	44.63
Solyc04g056620.1.1	Tomato	plasma membrane	32.27	40.63
Zm00001d043660_P001	Maize	plasma membrane	32.27	38.95
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	27.92	38.01
Zm00001d043179_P001	Maize	plasma membrane	31.81	31.1
Zm00001d045219_P001	Maize	plasma membrane	34.78	26.16
Zm00001d044083_P001	Maize	plasma membrane	36.38	26.07
Zm00001d018024_P001	Maize	plasma membrane	34.55	25.38
Zm00001d052442_P001	Maize	plasma membrane	33.18	25.31
Zm00001d052269_P001	Maize	plasma membrane	34.55	25.29
Zm00001d044812_P001	Maize	plasma membrane	34.78	25.29
Zm00001d046893_P001	Maize	golgi, plasma membrane, vacuole	34.1	23.43

Protein Annotations

EnsemblPlants:Zm00001d031594_P001	EnsemblPlants:Zm00001d031594_T001	EnsemblPlantsGene:Zm00001d031594	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF11
PFAM:PF03547	ProteinID:ONM03187.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000843C398	UniProt:A0A1D6KJT2
MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:	:	:	:

Description

PIN-formed protein7 PIN-formed protein7

Coordinates

chr1:-:195810416..195812223

Molecular Weight (calculated)

45855.1 Da

IEP (calculated)

8.540

GRAVY (calculated)

0.519

Length

437 amino acids

Sequence
(BLAST)

001: MIAWGDIYNV VSGMAPLYFA LVLGYGSVRW WRLFTAAQCG AINTLVANFS MPFFTLDFLA RADPYAMNYR VLAADAVSKA LLAVAAGGGA GSRSSSWAIT
101: GFSLAGFNNT LVVGVPLLFA MYGKWAQDLV VQVAVVQALV WFPLLLLGFE LRRAWVGGVP RAQGVGVGVG RCSSDDDDGD GHLGGRVGPV SLPPPLKTKD
201: VEMNAAEEEA ADDDAPAAAG AIRLWPTVRT VGLKLVGNPM STPAWSAWCG RASPTGRDHA VRSPCTHHLR CVCTAKCHPA AAVLPSPSRA CMRSCADVSR
301: PWRVCACRWD LSLPGIVTGS LGVMSRTGTG MSMFSMGMFM AQQERVIACG AGLAALGLAL RFVAGPLATL VGAAAFGLRG DVLRFAIIQA ALPQSIASFV
401: YAKEYGVHAD VLSTAVILGT LVSLPVLIAY YAVLGIL

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.