CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Os08t0529000-01	Rice	plasma membrane	61.87	50.0
TraesCS7A01G258800.1	Wheat	plasma membrane, vacuole	59.53	48.5
PGSC0003DMT400017301	Potato	golgi, plasma membrane	27.76	46.89
TraesCS7D01G259700.1	Wheat	plasma membrane, vacuole	59.53	46.84
Zm00001d031594_P001	Maize	plasma membrane	63.21	43.25
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	45.82	36.93
KXG33996	Sorghum	plasma membrane	40.47	32.18
PGSC0003DMT400046253	Potato	plasma membrane	36.79	30.99
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	32.11	29.91
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	35.79	29.89
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	34.11	28.25
Solyc04g056620.1.1	Tomato	plasma membrane	31.1	26.8
EES03524	Sorghum	plasma membrane	29.77	24.59
EES03766	Sorghum	golgi, plasma membrane, vacuole	28.09	18.92
EER88128	Sorghum	golgi, plasma membrane	33.11	16.34
EES09211	Sorghum	golgi, plasma membrane	31.77	16.3
EES05538	Sorghum	golgi, plasma membrane	32.44	16.03
EER89254	Sorghum	golgi, plasma membrane, vacuole	31.77	15.83
EER88769	Sorghum	plasma membrane	33.11	15.81
EES01159	Sorghum	golgi, plasma membrane	33.44	15.31
PGSC0003DMT400017300	Potato	plasma membrane	1.67	5.05

Protein Annotations

EnsemblPlants:OQU80833	EnsemblPlantsGene:SORBI_3007G195201	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF11	PFAM:PF03547
ProteinID:OQU80833	ProteinID:OQU80833.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI000B8B9AAF	UniProt:A0A1Z5RAN2
MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr7:+:62745051..62746191

Molecular Weight (calculated)

31967.1 Da

IEP (calculated)

7.420

GRAVY (calculated)

0.149

Length

299 amino acids

Sequence
(BLAST)

001: MIPWGDIYKV VAAMAPLYFA LGLGYGSVRW WRFFTAEQCA AINTLVVNFS MPFFTFDFLA RANPYTMNYR VLAADAVSKA LAIAAVSAWG CCCRGGKAAG
101: AQAWAITGFS LAGFNNTLVV GVPLLYAMYG KWAQDLIVQI AVVQSLFWFP LLLLGFELRK AWWVGIPSAQ GGGGGSRCNS SNSDDDDDSA GGGRVGPVSS
201: SSASSSSPPP SPPPKKDAAA EKDVEMNAEE TAAAAAGTTI RLWPLVRTVG LKLAGNPNVY ASVLGVVWAC IAYRWDRHRD GIAGRHVQDW HGDEHVEHG

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.