Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 5
- golgi 5
- cytosol 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044812_P001 | Maize | plasma membrane | 96.04 | 96.84 |
| Os06t0232300-01 | Rice | plasma membrane | 90.59 | 92.74 |
| EES05538 | Sorghum | golgi, plasma membrane | 86.3 | 86.45 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 73.43 | 78.21 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 67.82 | 74.59 |
| EES09211 | Sorghum | golgi, plasma membrane | 62.87 | 65.35 |
| EES01159 | Sorghum | golgi, plasma membrane | 63.7 | 59.11 |
| EER88769 | Sorghum | plasma membrane | 59.08 | 57.19 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 54.29 | 54.83 |
| EES03524 | Sorghum | plasma membrane | 31.85 | 53.31 |
| KXG35972 | Sorghum | extracellular, plasma membrane, vacuole | 27.89 | 45.55 |
| KXG33996 | Sorghum | plasma membrane | 27.89 | 44.95 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 31.52 | 43.02 |
| OQU80833 | Sorghum | extracellular | 16.34 | 33.11 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EntrezGene:8057886 | InterPro:Auxin_eff_plant | UniProt:C5Z7E9 | EnsemblPlants:EER88128 |
| ProteinID:EER88128 | ProteinID:EER88128.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009926 | GO:GO:0009987 |
| GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF19 | EnsemblPlantsGene:SORBI_3010G095100 | TIGRFAMs:TIGR00946 |
| TMHMM:TMhelix | UniParc:UPI0001A893DE | RefSeq:XP_002436761.1 | SEG:seg | : | : |
Description
hypothetical protein
Coordinates
chr10:+:8530698..8534268
Molecular Weight (calculated)
65743.0 Da
IEP (calculated)
8.851
GRAVY (calculated)
0.213
Length
606 amino acids
Sequence
(BLAST)
(BLAST)
001: MITGTDFYHV MTAMVPLYVA MILAYGSVRW WRIFTPDQCS GINRFVALFA VPLLSFHFIS TNNPYTMNLR FIAADTLQKL IVLALLTAWS YLSRRGCLEW
101: TITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARIL ITEQFPDTAG AIASIVVDPD VVSLDGRNDA IETEAEVKED
201: GKIHVTVRRS NASRSDIYSR RSMGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMVGRSSN FAAGDAFGLR TGATPRPSNY EEEAQGGKAA
301: NKYGGQYPAP NPAMAAQPMP TKQGLKKAAA NGQAKGEDGK DLHMFVWSSS ASPVSDVFGN GAAEYNDAAA VKEVRMAVAS PRKVAADGRK ERGEDFTERD
401: DFSFGNKGAA ERDAEAGDEK AAALQVGNAC GVAAAPAAMP PTSVMTRLIL IMVWRKLIRN PNTYSSLIGL VWSLVCFRWN FEMPAIILKS ISILSDAGLG
501: MAMFSLGLFM ALQPRIIACG NKVATFAMAV RFLTGPAVMA AASLAVGLRG TLLHVAIVQA ALPQGIVPFV FAKEYGVHPD ILSTAVIFGM LIALPITLVY
601: YILMGL
101: TITLFSLSTL PNTLVMGIPL LKGMYGDFSG SLMVQIVVLQ CIIWYTLMLF MFEYRGARIL ITEQFPDTAG AIASIVVDPD VVSLDGRNDA IETEAEVKED
201: GKIHVTVRRS NASRSDIYSR RSMGFSSTTP RPSNLTNAEI YSLQSSRNPT PRGSSFNHTD FYSMVGRSSN FAAGDAFGLR TGATPRPSNY EEEAQGGKAA
301: NKYGGQYPAP NPAMAAQPMP TKQGLKKAAA NGQAKGEDGK DLHMFVWSSS ASPVSDVFGN GAAEYNDAAA VKEVRMAVAS PRKVAADGRK ERGEDFTERD
401: DFSFGNKGAA ERDAEAGDEK AAALQVGNAC GVAAAPAAMP PTSVMTRLIL IMVWRKLIRN PNTYSSLIGL VWSLVCFRWN FEMPAIILKS ISILSDAGLG
501: MAMFSLGLFM ALQPRIIACG NKVATFAMAV RFLTGPAVMA AASLAVGLRG TLLHVAIVQA ALPQGIVPFV FAKEYGVHPD ILSTAVIFGM LIALPITLVY
601: YILMGL
001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL
Arabidopsis Description
PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.