Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi
Predictor Summary:
Predictor Summary:
- nucleus 2
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G23080.1 | EES09373 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | EES16732 | AT1G35670.1 | 19130088 |
| AT1G23080.1 | EES09373 | AT4G09570.1 | 19130088 |
| AT1G23080.1 | EES16732 | AT4G09570.1 | 19130088 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Zm00001d044083_P001 | Maize | plasma membrane | 85.91 | 91.97 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 76.57 | 80.91 |
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 69.22 | 76.61 |
| HORVU3Hr1G057630.3 | Barley | plasma membrane | 69.83 | 76.25 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 69.37 | 76.13 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 66.16 | 71.17 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 62.94 | 67.49 |
| CDY63826 | Canola | plasma membrane | 58.04 | 67.32 |
| CDY40380 | Canola | plasma membrane | 57.89 | 67.26 |
| CDY25767 | Canola | plasma membrane | 58.65 | 66.84 |
| CDY68262 | Canola | plasma membrane | 59.57 | 66.61 |
| CDX96288 | Canola | golgi, plasma membrane | 59.42 | 66.55 |
| CDY12491 | Canola | plasma membrane | 58.04 | 66.03 |
| CDY23471 | Canola | golgi, plasma membrane | 49.46 | 65.52 |
| CDX68327 | Canola | plasma membrane | 48.39 | 65.15 |
| KRH38202 | Soybean | plasma membrane | 62.17 | 64.04 |
| EER88128 | Sorghum | golgi, plasma membrane | 59.11 | 63.7 |
| Bra012358.1-P | Field mustard | golgi, plasma membrane | 58.81 | 63.68 |
| VIT_01s0011g04860.t01 | Wine grape | golgi, plasma membrane | 62.79 | 63.17 |
| EES09211 | Sorghum | golgi, plasma membrane | 55.59 | 62.26 |
| AT2G01420.2 | Thale cress | plasma membrane | 58.65 | 62.18 |
| Solyc04g007690.2.1 | Tomato | plasma membrane | 58.35 | 62.15 |
| EES05538 | Sorghum | golgi, plasma membrane | 57.12 | 61.65 |
| KRH49577 | Soybean | plasma membrane | 52.37 | 61.51 |
| CDX91695 | Canola | plasma membrane | 53.75 | 61.47 |
| EER89254 | Sorghum | golgi, plasma membrane, vacuole | 56.36 | 61.33 |
| PGSC0003DMT400078330 | Potato | golgi, plasma membrane | 60.95 | 60.86 |
| Solyc05g008060.2.1 | Tomato | nucleus | 60.8 | 60.8 |
| AT1G23080.1 | Thale cress | plasma membrane | 57.58 | 60.74 |
| AT1G70940.1 | Thale cress | plasma membrane | 59.42 | 60.62 |
| KRG89296 | Soybean | plasma membrane | 61.56 | 60.36 |
| KRH50369 | Soybean | plasma membrane | 61.26 | 60.15 |
| CDY41467 | Canola | plasma membrane | 53.75 | 60.1 |
| Bra016366.1-P | Field mustard | golgi, plasma membrane | 53.6 | 59.93 |
| CDY09501 | Canola | plasma membrane | 50.23 | 58.16 |
| Bra003938.1-P | Field mustard | golgi, plasma membrane | 48.24 | 57.69 |
| PGSC0003DMT400015267 | Potato | cytosol | 39.82 | 56.03 |
| Bra016173.1-P | Field mustard | plasma membrane | 53.29 | 55.06 |
| EES03524 | Sorghum | plasma membrane | 30.32 | 54.7 |
| EER88769 | Sorghum | plasma membrane | 52.37 | 54.63 |
| Bra026669.1-P | Field mustard | golgi, plasma membrane | 56.36 | 46.17 |
| KXG35972 | Sorghum | extracellular, plasma membrane, vacuole | 26.03 | 45.82 |
| KXG33996 | Sorghum | plasma membrane | 26.19 | 45.48 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 26.49 | 38.96 |
| OQU80833 | Sorghum | extracellular | 15.31 | 33.44 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | EntrezGene:8054943 | InterPro:Auxin_eff_plant | UniProt:C5XF44 | EnsemblPlants:EES01159 |
| ProteinID:EES01159 | ProteinID:EES01159.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0005622 |
| GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009921 | GO:GO:0009926 |
| GO:GO:0009987 | GO:GO:0010252 | GO:GO:0010315 | GO:GO:0010329 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF37 | EnsemblPlantsGene:SORBI_3003G235800 |
| TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI0001A84474 | RefSeq:XP_002456039.1 | SEG:seg | : |
Description
hypothetical protein
Coordinates
chr3:+:57437629..57442175
Molecular Weight (calculated)
68632.4 Da
IEP (calculated)
8.445
GRAVY (calculated)
0.337
Length
653 amino acids
Sequence
(BLAST)
(BLAST)
001: MISGNDVYTV LTAMVPLYVA MFLAYGSVRW WRIFTPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FLAADTLQKL LVLAGLAVWS RLLPTSSGRL
101: AAPRLDWSIT LFSVSTLPNT LVMGIPLLIA MYGPYAGSLM VQVIVLQCII WYTLLLFLFE FRAARMLIAD QFPDTAAAIA SLHVDADVVS LEGGRAETEA
201: EVAEDGRLHV TVRRSSASSR RSLLMVTTTP RPSNLTGAEI YSMSSSRQHS PRGSNFNHAD FFAAMAMVDG APPPPPPAGG ARASSFGAAE LYSMHSSRGP
301: TPRQSNFDER SASARSSSRP AGAVPSCHDA KELHMFVWSS SASPVSEVSG LPVFTGGAGG GVNVGAKEIR MVVPAELPLP QNGSAGKEKE SNGAVAAAAT
401: GEAAEAFGFG GGKTATAEDA AEAVEAGGGG PEQVTKLVGS SCSTTAAEVR VKDVDGVADG GGGGGYDPDD AGGGGGGRAQ QQMPPASVMT RLILIMVWRK
501: LIRNPNTYSS LIGLAWSLIA FRWHISMPAV VAKSISILSD AGLGMAMFSL GLFMALQPNI IACGWRATGI SMGVRFLAGP AVMTAASLAI GLRGNLLRVA
601: IVQAALPQGI VPFVFAKEYN VHPAILSTMV IFGMLIALPI TLLYYILLGL KPV
101: AAPRLDWSIT LFSVSTLPNT LVMGIPLLIA MYGPYAGSLM VQVIVLQCII WYTLLLFLFE FRAARMLIAD QFPDTAAAIA SLHVDADVVS LEGGRAETEA
201: EVAEDGRLHV TVRRSSASSR RSLLMVTTTP RPSNLTGAEI YSMSSSRQHS PRGSNFNHAD FFAAMAMVDG APPPPPPAGG ARASSFGAAE LYSMHSSRGP
301: TPRQSNFDER SASARSSSRP AGAVPSCHDA KELHMFVWSS SASPVSEVSG LPVFTGGAGG GVNVGAKEIR MVVPAELPLP QNGSAGKEKE SNGAVAAAAT
401: GEAAEAFGFG GGKTATAEDA AEAVEAGGGG PEQVTKLVGS SCSTTAAEVR VKDVDGVADG GGGGGYDPDD AGGGGGGRAQ QQMPPASVMT RLILIMVWRK
501: LIRNPNTYSS LIGLAWSLIA FRWHISMPAV VAKSISILSD AGLGMAMFSL GLFMALQPNI IACGWRATGI SMGVRFLAGP AVMTAASLAI GLRGNLLRVA
601: IVQAALPQGI VPFVFAKEYN VHPAILSTMV IFGMLIALPI TLLYYILLGL KPV
001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLR FIAADTLQKI IMLSLLVLWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEFRGAKML IMEQFPETAA SIVSFKVESD VVSLDGHDFL ETDAEIGDDG
201: KLHVTVRKSN ASRRSFCGPN MTPRPSNLTG AEIYSLSTTP RGSNFNHSDF YNMMGFPGGR LSNFGPADMY SVQSSRGPTP RPSNFEENCA MASSPRFGYY
301: PGGGAGSYPA PNPEFSSTTT STANKSVNKN PKDVNTNQQT TLPTGGKSNS HDAKELHMFV WSSNGSPVSD RAGLNVFGGA PDNDQGGRSD QGAKEIRMLV
401: PDQSHNGETK AVAHPASGDF GGEQQFSFAG KEEEAERPKD AENGLNKLAP NSTAALQSKT GLGGAEASQR KNMPPASVMT RLILIMVWRK LIRNPNTYSS
501: LIGLIWALVA FRWHVAMPKI IQQSISILSD AGLGMAMFSL GLFMALQPKL IACGNSVATF AMAVRFLTGP AVMAVAAIAI GLRGDLLRVA IVQAALPQGI
601: VPFVFAKEYN VHPAILSTGV IFGMLIALPI TLVYYILLGL
Arabidopsis Description
PIN3Auxin efflux carrier component 3 [Source:UniProtKB/Swiss-Prot;Acc:Q9S7Z8]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.