CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi

Predictor Summary:

cytosol 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane
Any Predictor:	cytosol, plastid, secretory
BaCelLo:	cytosol
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68327	Canola	plasma membrane	94.52	96.08
Bra003938.1-P	Field mustard	golgi, plasma membrane	92.29	83.33
CDX96288	Canola	golgi, plasma membrane	92.9	78.56
CDY68262	Canola	plasma membrane	92.9	78.42
CDY25767	Canola	plasma membrane	82.96	71.38
CDY12491	Canola	plasma membrane	82.96	71.25
AT1G70940.1	Thale cress	plasma membrane	92.09	70.94
CDY40380	Canola	plasma membrane	77.08	67.62
CDX91695	Canola	plasma membrane	78.09	67.43
CDY63826	Canola	plasma membrane	76.88	67.32
CDY41467	Canola	plasma membrane	78.3	66.1
PGSC0003DMT400015267	Potato	cytosol	60.45	64.22
Solyc04g007690.2.1	Tomato	plasma membrane	77.48	62.32
VIT_01s0011g04860.t01	Wine grape	golgi, plasma membrane	80.53	61.17
CDY09501	Canola	plasma membrane	69.78	60.99
KRH38202	Soybean	plasma membrane	78.09	60.73
Solyc05g008060.2.1	Tomato	nucleus	79.92	60.34
PGSC0003DMT400078330	Potato	golgi, plasma membrane	79.92	60.24
KRG89296	Soybean	plasma membrane	79.51	58.86
KRH50369	Soybean	plasma membrane	79.31	58.8
KRH49577	Soybean	plasma membrane	64.5	57.19
CDX82059	Canola	golgi, plasma membrane	60.85	57.03
CDX96484	Canola	plasma membrane	61.66	56.82
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	55.78	56.82
GSMUA_Achr7P17140_001	Banana	plasma membrane	66.13	56.01
GSMUA_Achr1P25190_001	Banana	golgi, plasma membrane, vacuole	68.15	55.35
TraesCS3D01G221900.1	Wheat	plasma membrane	65.52	54.75
TraesCS3A01G231500.1	Wheat	plasma membrane	65.52	54.29
CDY47745	Canola	golgi, plasma membrane	63.08	54.18
Os01t0643300-01	Rice	golgi, plasma membrane, vacuole	67.14	53.56
Zm00001d044083_P001	Maize	plasma membrane	65.92	53.28
CDY38263	Canola	plasma membrane	58.62	50.0
CDY11886	Canola	plasma membrane	62.47	49.76
EES01159	Sorghum	golgi, plasma membrane	65.52	49.46
CDY20694	Canola	plasma membrane	62.47	48.5
CDX88606	Canola	plasma membrane	62.47	47.9
CDY69709	Canola	plasma membrane	58.82	47.85
CDY53978	Canola	plasma membrane	57.81	47.82
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	57.4	47.48
Zm00001d045219_P001	Maize	plasma membrane	55.58	47.16
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	57.0	47.07
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	55.78	46.53
EER89254	Sorghum	golgi, plasma membrane, vacuole	56.39	46.33
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	56.19	46.24
TraesCS3B01G260700.1	Wheat	plasma membrane	57.0	46.14
CDY72296	Canola	golgi, plasma membrane	40.77	44.37
CDX85565	Canola	plasma membrane	30.83	41.99
CDX88341	Canola	plasma membrane	47.87	41.62
CDX87543	Canola	plasma membrane	47.67	41.45
CDY63766	Canola	golgi, plasma membrane	24.14	40.07
CDY67254	Canola	golgi, plasma membrane, vacuole	27.59	39.08
CDX70699	Canola	golgi, plasma membrane, vacuole	27.59	39.08
CDX69445	Canola	golgi, plasma membrane, vacuole	27.59	39.08
CDX69551	Canola	endoplasmic reticulum, extracellular, vacuole	16.02	35.27
CDY66594	Canola	plasma membrane	31.64	34.74
CDX78697	Canola	plasma membrane	27.59	34.52
HORVU7Hr1G038700.9	Barley	nucleus, plastid	26.17	18.56
CDX85566	Canola	cytosol	3.45	6.16

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	GO:A0A078GDM2	UniProt:A0A078GDM2	InterPro:Auxin_eff_plant	EnsemblPlants:CDY23471
ProteinID:CDY23471	ProteinID:CDY23471.1	GO:GO:0005575	GO:GO:0006810	GO:GO:0007154	GO:GO:0007165
GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	EnsemblPlantsGene:GSBRNA2T00022089001	InterPro:Mem_trans	PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF36
TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI0004EE547E	:	:	:

Description

BnaC06g24400DAuxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A078GDM2]

Coordinates

chrLK032144:-:10406..14665

Molecular Weight (calculated)

53778.7 Da

IEP (calculated)

8.451

GRAVY (calculated)

0.256

Length

493 amino acids

Sequence
(BLAST)

001: MISWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS TNNPYAMNLL VVLQCIIWYT LLLFLFEFRG AKMLIMEQFP
101: ETAASIVSFK VESDVVSLDG HDFLETDAEI GNDGKLHVTV RKSNASRRSF CGPNMTPRPS NLTGAEIYSL STTPRGSNFN QSDFYSMMGF PGGRPTPRPS
201: NFEENCAMAS SPKFGSKELH MFVWSSNGSP VSDRAGLNAP DLGSNNEQEI RMLVPDQSQN SENKALARPA SGDFGGEPVI ITRREEGERA KDAENGLNKA
301: VPNAVLQSKT GLGAAAEGEA SQGKHMPPAS VMTRLILIMV WRKLIRNPNT YSSLIGLIWA LVAFRWHVAM PKIIQQSISI LSDAGLGMAM FSLGLFMALQ
401: PKLIACGNSV ATFAMAVRFL TGPAVMAVAS IAIGLRGDLL RVAIVQAALP QGIVPFVFAK EYNVHPAILS TGVIFGMLIA LPITLVYYIL LGL

Best Arabidopsis Sequence Match ( AT1G23080.1 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.