Factsheet for HORVU7Hr1G038700.9

Subcellular Localization

min:

: max

Winner_takes_all: plastid, nucleus

Predictor Summary:

plastid 3
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	nucleus, plastid
Any Predictor:	nucleus, plastid
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	nucleus
TargetP:	plastid
YLoc:	nucleus

PPI

Inferred distinct locusB in Crop

locusB	locations
HORVU4Hr1G019530.1
HORVU5Hr1G032550.3

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G23080.1	HORVU4Hr1G019530.1	AT1G35670.1	19130088
AT1G23080.1	HORVU5Hr1G032550.3	AT1G35670.1	19130088
AT1G23080.1	HORVU4Hr1G019530.1	AT4G09570.1	19130088
AT1G23080.1	HORVU5Hr1G032550.3	AT4G09570.1	19130088

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX68327	Canola	plasma membrane	18.27	26.19
CDY25767	Canola	plasma membrane	21.58	26.18
CDY23471	Canola	golgi, plasma membrane	18.56	26.17
HORVU6Hr1G076110.2	Barley	plasma membrane	22.3	25.79
CDY12491	Canola	plasma membrane	21.3	25.78
CDX96288	Canola	golgi, plasma membrane	21.44	25.56
CDY68262	Canola	plasma membrane	21.44	25.51
CDY40380	Canola	plasma membrane	20.43	25.27
PGSC0003DMT400015267	Potato	cytosol	16.83	25.22
Bra012358.1-P	Field mustard	golgi, plasma membrane	21.87	25.21
HORVU3Hr1G057630.3	Barley	plasma membrane	21.44	24.92
CDX91695	Canola	plasma membrane	20.43	24.87
CDY63826	Canola	plasma membrane	20.14	24.87
Bra003938.1-P	Field mustard	golgi, plasma membrane	19.14	24.36
KRH49577	Soybean	plasma membrane	19.42	24.28
HORVU3Hr1G067670.3	Barley	plasma membrane	12.37	24.09
AT1G23080.1	Thale cress	plasma membrane	21.44	24.07
AT1G70940.1	Thale cress	plasma membrane	22.16	24.06
CDY09501	Canola	plasma membrane	19.42	23.94
Solyc04g007690.2.1	Tomato	plasma membrane	21.01	23.82
KRH38202	Soybean	plasma membrane	21.73	23.82
CDY41467	Canola	plasma membrane	20.0	23.8
Bra016366.1-P	Field mustard	golgi, plasma membrane	20.0	23.8
Solyc05g008060.2.1	Tomato	nucleus	22.3	23.74
VIT_01s0011g04860.t01	Wine grape	golgi, plasma membrane	22.16	23.73
PGSC0003DMT400078330	Potato	golgi, plasma membrane	22.3	23.7
AT2G01420.2	Thale cress	plasma membrane	20.72	23.38
HORVU5Hr1G076060.2	Barley	mitochondrion	12.23	23.35
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	20.29	23.23
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	21.15	23.19
Bra016173.1-P	Field mustard	plasma membrane	21.01	23.1
KRG89296	Soybean	plasma membrane	22.01	22.97
KRH50369	Soybean	plasma membrane	21.87	22.86
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	18.99	22.56
HORVU5Hr1G076210.1	Barley	plasma membrane	11.94	22.49
HORVU3Hr1G094000.3	Barley	plasma membrane	11.8	21.41
HORVU4Hr1G026680.4	Barley	plastid	21.87	19.46
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	11.8	19.07
Bra026669.1-P	Field mustard	golgi, plasma membrane	20.72	18.07
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	9.21	14.88
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	5.18	13.33

Protein Annotations

EnsemblPlants:HORVU7Hr1G038700.9	EnsemblPlantsGene:HORVU7Hr1G038700	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF19	PFAM:PF03547
SEG:seg	UniParc:UPI000B47E70A	UniProt:A0A287W4D6	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:

Description

No Description!

Coordinates

chrchr7H:-:99250052..99253117

Molecular Weight (calculated)

78163.7 Da

IEP (calculated)

12.632

GRAVY (calculated)

-0.890

Length

695 amino acids

Sequence
(BLAST)

001: HWLPRPRLPP PYRHRARAIN QASAAPLERR TSPHRTPPLP RRRVSVGRKS ERLLSQRRRR RRPARQDDHG HGLLPRHDGD GAAVRGDDAR VRVRQVVADL
101: HAGPVLRDQP LRGALRRAAA VLPLHLQQQP LHHEPPLHRR RHPAEAHRAR AAHPLEPPLP QRLPRVDHHP LLPLHAAQHP RHGHPAPQGH VRRRVRQPHG
201: ADRGAAVHHL VHAHALHVRV PRRQDPHHRA VPRHRRRHRL HRRRPRRHVA RRQEGHDRDG GGGQGGRQDS RHRPPLQRLT LRHLLAPVHG VLQHHAATQQ
301: PHQRRDLLAA VVAEPHAPGL QLQPHRLLLH GGTQLQLRRR GRVRPGGAHR GHAAPVQLRG GQGRQQQQQQ QQQIRAVPGA QPRDGGAAEA GQEGGQRAGQ
401: GRGRQGPAHV RVELQRVARV RRVRQRHRGV QRGRRQGRPR RRRLAAQRAD GVERDEFSFG NKERDAEAGD EKAAAEQGTA GLVPAPTAMP PTSVMTRLIL
501: IMVWRKLIRN PNTYSSLIGL IWSLVCFRWN FVMPAIIMKS IAILSDAGLG MAMFSLGALL CSALHLRACM HHACEPTVVH LIHIRRGADI RMCRAVHGAA
601: AADHRVREQE GDVRHGRAVP DGPGRHGRRL HRRRPPRHAP PHRHRAGSAA PGHCPLRLRQ GVQRAPRHPQ HGCHLRHAHR AAHHAGLLHP AGAVS

Best Arabidopsis Sequence Match ( AT1G73590.1 )
(BLAST)

001: MITAADFYHV MTAMVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIA ANNPYAMNLR FLAADSLQKV IVLSLLFLWC KLSRNGSLDW
101: TITLFSLSTL PNTLVMGIPL LKGMYGNFSG DLMVQIVVLQ CIIWYTLMLF LFEYRGAKLL ISEQFPDTAG SIVSIHVDSD IMSLDGRQPL ETEAEIKEDG
201: KLHVTVRRSN ASRSDIYSRR SQGLSATPRP SNLTNAEIYS LQSSRNPTPR GSSFNHTDFY SMMASGGGRN SNFGPGEAVF GSKGPTPRPS NYEEDGGPAK
301: PTAAGTAAGA GRFHYQSGGS GGGGGAHYPA PNPGMFSPNT GGGGGTAAKG NAPVVGGKRQ DGNGRDLHMF VWSSSASPVS DVFGGGGGNH HADYSTATND
401: HQKDVKISVP QGNSNDNQYV EREEFSFGNK DDDSKVLATD GGNNISNKTT QAKVMPPTSV MTRLILIMVW RKLIRNPNSY SSLFGITWSL ISFKWNIEMP
501: ALIAKSISIL SDAGLGMAMF SLGLFMALNP RIIACGNRRA AFAAAMRFVV GPAVMLVASY AVGLRGVLLH VAIIQAALPQ GIVPFVFAKE YNVHPDILST
601: AVIFGMLIAL PITLLYYILL GL

Arabidopsis Description

PIN1Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178WFG7]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.