Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 5
- vacuole 5
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3A01G331300.1 | Wheat | plasma membrane | 94.19 | 93.75 |
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 92.79 | 93.22 |
| TraesCS3D01G324800.1 | Wheat | plasma membrane | 93.02 | 92.81 |
| Os01t0802700-01 | Rice | plasma membrane | 74.42 | 75.12 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 72.33 | 70.05 |
| Zm00001d043179_P001 | Maize | plasma membrane | 70.0 | 67.34 |
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 44.42 | 62.22 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 48.6 | 57.26 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 33.72 | 40.62 |
| HORVU5Hr1G076210.1 | Barley | plasma membrane | 30.47 | 35.5 |
| HORVU3Hr1G094000.3 | Barley | plasma membrane | 30.23 | 33.94 |
| HORVU1Hr1G072970.9 | Barley | golgi, plasma membrane, vacuole | 38.84 | 28.55 |
| HORVU1Hr1G091030.2 | Barley | golgi, plasma membrane, vacuole | 39.3 | 27.84 |
| HORVU5Hr1G076120.2 | Barley | golgi, plasma membrane, vacuole | 17.21 | 27.41 |
| HORVU3Hr1G057630.3 | Barley | plasma membrane | 37.91 | 27.26 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 37.21 | 26.62 |
| HORVU7Hr1G110470.7 | Barley | golgi, plasma membrane, vacuole | 38.14 | 25.87 |
| HORVU4Hr1G026680.4 | Barley | plastid | 39.53 | 21.77 |
| HORVU5Hr1G076060.2 | Barley | mitochondrion | 16.74 | 19.78 |
| HORVU3Hr1G111420.1 | Barley | mitochondrion, plastid | 18.37 | 18.37 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 19.07 | 11.8 |
Protein Annotations
| EnsemblPlants:HORVU3Hr1G078620.1 | EnsemblPlantsGene:HORVU3Hr1G078620 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF9 | PFAM:PF03547 |
| SEG:seg | TMHMM:TMhelix | UniParc:UPI000294FB8E | UniProt:M0VX90 | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 |
Description
No Description!
Coordinates
chrchr3H:+:579384034..579387081
Molecular Weight (calculated)
45765.4 Da
IEP (calculated)
9.159
GRAVY (calculated)
0.516
Length
430 amino acids
Sequence
(BLAST)
(BLAST)
001: MITGLAVYHV VEAMAPLYTA AVLGYASVRW LKAFSEEQCA GINHFVAIYA VPVLIFNMVS TNNPYAMNGR LVAADTLQKA VMLLGLVAWA AWESRSRRRR
101: RRSDDGGGKA AASAAAASPL QWVVTAFSVA SLPNTIIMGV PLLGGMYGAM SKDLMKQIVV MQFCVWYNVV IFIYEYMAAR RAATAVDGGA KISPGSPGAV
201: PSAEKIATHD EAAVAAKRAH EVTVNIEITE VTPASTTQQK DGPDDTTTTS ADAEAEQASS PPAKSTAPSV RHIALMAGKK VLKIPNTYAS FLGLIWALIA
301: FKCGMKMPKI IDDSLFTIQT TAVGLSMFAS GTFIARQSRF VPCGYAIASM SMVLKFLIGP VVMLLASLAI GMHGTLLHIA VVQAALPLAV TSFVYAEEYK
401: VHADIMSTGV ILGIFISLPV TIVYYIVLGL
101: RRSDDGGGKA AASAAAASPL QWVVTAFSVA SLPNTIIMGV PLLGGMYGAM SKDLMKQIVV MQFCVWYNVV IFIYEYMAAR RAATAVDGGA KISPGSPGAV
201: PSAEKIATHD EAAVAAKRAH EVTVNIEITE VTPASTTQQK DGPDDTTTTS ADAEAEQASS PPAKSTAPSV RHIALMAGKK VLKIPNTYAS FLGLIWALIA
301: FKCGMKMPKI IDDSLFTIQT TAVGLSMFAS GTFIARQSRF VPCGYAIASM SMVLKFLIGP VVMLLASLAI GMHGTLLHIA VVQAALPLAV TSFVYAEEYK
401: VHADIMSTGV ILGIFISLPV TIVYYIVLGL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.