Factsheet for HORVU5Hr1G076120.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017301	Potato	golgi, plasma membrane	28.15	42.94
HORVU5Hr1G076210.1	Barley	plasma membrane	56.3	41.19
TraesCS5A01G284500.1	Wheat	extracellular, plasma membrane, vacuole	48.52	35.89
TraesCS5B01G283500.1	Wheat	extracellular, plasma membrane, vacuole	48.89	35.87
Zm00001d006082_P001	Maize	extracellular, plasma membrane, vacuole	48.15	35.62
TraesCS5D01G291800.1	Wheat	extracellular, plasma membrane, vacuole	47.78	35.15
TraesCS5B01G283600.1	Wheat	plasma membrane	47.04	34.89
KXG35972	Sorghum	extracellular, plasma membrane, vacuole	46.67	33.96
HORVU3Hr1G094000.3	Barley	plasma membrane	42.59	30.03
PGSC0003DMT400046253	Potato	plasma membrane	33.7	25.63
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	33.33	24.93
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	32.59	24.58
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	27.41	23.05
Solyc04g056620.1.1	Tomato	plasma membrane	27.41	21.33
HORVU3Hr1G067670.3	Barley	plasma membrane	25.93	19.61
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	27.41	17.21
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	31.11	14.36
HORVU3Hr1G057630.3	Barley	plasma membrane	30.74	13.88
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	30.37	13.51
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	31.11	13.25
HORVU6Hr1G076110.2	Barley	plasma membrane	28.89	12.98
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	20.0	12.56
HORVU4Hr1G026680.4	Barley	plastid	31.48	10.88
HORVU5Hr1G076060.2	Barley	mitochondrion	11.85	8.79
PGSC0003DMT400017300	Potato	plasma membrane	2.22	6.06
HORVU7Hr1G038700.9	Barley	nucleus, plastid	13.33	5.18

Protein Annotations

EnsemblPlants:HORVU5Hr1G076120.2	EnsemblPlantsGene:HORVU5Hr1G076120	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15	PFAM:PF03547
SEG:seg	TMHMM:TMhelix	UniParc:UPI000B46ED94	UniProt:A0A287RUN0	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1

Description

No Description!

Coordinates

chrchr5H:-:549517812..549520630

Molecular Weight (calculated)

29427.1 Da

IEP (calculated)

8.612

GRAVY (calculated)

0.095

Length

270 amino acids

Sequence
(BLAST)

001: MIGWGDVYKV VSAMAPLYFA LGLGYASVRW WKSFTRDQCD AVNRLVIYFA LPFFSFDFNA HAGTFAASYR VLAADAVAKL VVVLAIAGWV ASCRWRHWSR
101: VPKAPPARPG PSWSWCITGY SLGTLNNGLF VGVPLLDAMY GKWARDIVVQ LSVLQAVVWL PLLVVAFEVR QAWLEVTSAP APDGAREEGG PAELGSERPA
201: AAGDGGDGVG VLGAAAADGW AQGRREPERV REPPWGCVVF RGKQVAPGDA GHSRWLDFDH VKDRSWNRNV

Best Arabidopsis Sequence Match ( AT5G16530.1 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.