Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 3
- golgi 4
- plasma membrane 5
- endoplasmic reticulum 3
- vacuole 3
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G221900.1 | Wheat | plasma membrane | 90.64 | 91.86 |
| TraesCS3A01G231500.1 | Wheat | plasma membrane | 90.97 | 91.43 |
| TraesCS3B01G260700.1 | Wheat | plasma membrane | 82.27 | 80.79 |
| Os01t0643300-01 | Rice | golgi, plasma membrane, vacuole | 81.27 | 78.64 |
| Zm00001d044083_P001 | Maize | plasma membrane | 74.75 | 73.28 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 71.91 | 70.84 |
| EES01159 | Sorghum | golgi, plasma membrane | 76.25 | 69.83 |
| HORVU1Hr1G091030.2 | Barley | golgi, plasma membrane, vacuole | 59.36 | 58.48 |
| HORVU1Hr1G072970.9 | Barley | golgi, plasma membrane, vacuole | 56.86 | 58.12 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 58.03 | 57.74 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 33.28 | 55.74 |
| HORVU7Hr1G110470.7 | Barley | golgi, plasma membrane, vacuole | 57.53 | 54.26 |
| HORVU4Hr1G026680.4 | Barley | plastid | 59.87 | 45.84 |
| HORVU3Hr1G094000.3 | Barley | plasma membrane | 29.26 | 45.69 |
| HORVU3Hr1G111420.1 | Barley | mitochondrion, plastid | 32.11 | 44.65 |
| HORVU5Hr1G076210.1 | Barley | plasma membrane | 26.92 | 43.63 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 27.26 | 37.91 |
| HORVU5Hr1G076060.2 | Barley | mitochondrion | 19.23 | 31.59 |
| HORVU5Hr1G076120.2 | Barley | golgi, plasma membrane, vacuole | 13.88 | 30.74 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 24.92 | 21.44 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | UniProt:A0A287L620 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0005623 |
| GO:GO:0005886 | GO:GO:0006810 | GO:GO:0007154 | GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 |
| GO:GO:0009734 | GO:GO:0009921 | GO:GO:0009926 | GO:GO:0009987 | GO:GO:0016020 | GO:GO:0016021 |
| GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G057630 | EnsemblPlants:HORVU3Hr1G057630.3 | InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 |
| PANTHER:PTHR31752:SF37 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000B487698 | SEG:seg | : |
Description
Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A287L620]
Coordinates
chrchr3H:+:433595579..433601319
Molecular Weight (calculated)
63757.6 Da
IEP (calculated)
7.982
GRAVY (calculated)
0.324
Length
598 amino acids
Sequence
(BLAST)
(BLAST)
001: MISLHDLYTV LAAVVPLYVA MILAYGSVRW WGIFTPDQCS GINRFVAIFA VPLLSFHFIS TNDPYEMNLR FLAADTLQKL LVLALLAVCS RLIPLRRAWV
101: PRLDWSITLF SLSTLPNTLV MGIPLLIAMY GPYAGSLMVQ IVVLQCIIWY TLLLFLFEFR AARMLIADQF PDTAASIASL HVDPDVVSLE GGRAETESKV
201: TVDGRLHVTV RRSSASRRST LMVTPRLSNL TGAEIYSVSS SQNPTPRGSN FNHADFFAMV GGAPPPPTPA RVGGSSFSAS EHYPVQSSQG PTPRGSNFDE
301: HSAGPKHAMT DAGPQHDHDA KELHMFVWSS SASPASEVSG LPMFNGGTGA AHLGGGAKEI RMVVPVDPPQ NGSCKEDGGY AAAARGGAKA VEDDGDAVQA
401: GADGLTAKLN SSPGDEDGAQ TGRARQHEMP PASVMTRLIL IMVWRKLIRN PNTYSSLIGL TWSLVAFRWQ VSMPRIVEKS ISILSDAGLG MAMFSLGLFM
501: ALQPSIIACG NSAAVASMAV RFLAGPAVTA AASAAVGLRG TLLKVAIVQA ALPQGIVPFV FAKEYNVHPA ILSTAVIFGM LIALPITLAY YALLALVH
101: PRLDWSITLF SLSTLPNTLV MGIPLLIAMY GPYAGSLMVQ IVVLQCIIWY TLLLFLFEFR AARMLIADQF PDTAASIASL HVDPDVVSLE GGRAETESKV
201: TVDGRLHVTV RRSSASRRST LMVTPRLSNL TGAEIYSVSS SQNPTPRGSN FNHADFFAMV GGAPPPPTPA RVGGSSFSAS EHYPVQSSQG PTPRGSNFDE
301: HSAGPKHAMT DAGPQHDHDA KELHMFVWSS SASPASEVSG LPMFNGGTGA AHLGGGAKEI RMVVPVDPPQ NGSCKEDGGY AAAARGGAKA VEDDGDAVQA
401: GADGLTAKLN SSPGDEDGAQ TGRARQHEMP PASVMTRLIL IMVWRKLIRN PNTYSSLIGL TWSLVAFRWQ VSMPRIVEKS ISILSDAGLG MAMFSLGLFM
501: ALQPSIIACG NSAAVASMAV RFLAGPAVTA AASAAVGLRG TLLKVAIVQA ALPQGIVPFV FAKEYNVHPA ILSTAVIFGM LIALPITLAY YALLALVH
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNGENK
401: AGPMNGDYGG EEESERVKEV PNGLHKLRCN STAELNPKEA IETGETVPVK HMPPASVMTR LILIMVWRKL IRNPNTYSSL IGLIWALVAF RWDVAMPKII
501: QQSISILSDA GLGMAMFSLG LFMALQPKLI ACGNSTATFA MAVRFFTGPA VMAVAAMAIG LRGDLLRVAI VQAALPQGIV PFVFAKEYNV HPAILSTGVI
601: FGMLIALPIT LVYYILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.