Factsheet for HORVU5Hr1G076060.2

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, nucleus
iPSORT:	mitochondrion
MultiLoc:	nucleus
Predotar:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	mitochondrion
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400017300	Potato	plasma membrane	17.03	62.63
Os09t0505400-00	Rice	mitochondrion, nucleus, peroxisome	37.64	33.09
HORVU3Hr1G094000.3	Barley	plasma membrane	26.65	25.33
PGSC0003DMT400046253	Potato	plasma membrane	24.45	25.07
Solyc01g068410.2.1	Tomato	extracellular, plasma membrane	23.63	24.02
HORVU5Hr1G076210.1	Barley	plasma membrane	23.08	22.76
HORVU3Hr1G067670.3	Barley	plasma membrane	22.25	22.69
VIT_04s0023g00450.t01	Wine grape	golgi, plasma membrane	21.15	21.33
HORVU3Hr1G057630.3	Barley	plasma membrane	31.59	19.23
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	31.59	18.95
Solyc04g056620.1.1	Tomato	plasma membrane	17.86	18.73
HORVU1Hr1G072970.9	Barley	golgi, plasma membrane, vacuole	29.67	18.46
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	19.78	16.74
HORVU6Hr1G076110.2	Barley	plasma membrane	27.47	16.64
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	28.57	16.4
PGSC0003DMT400027309	Potato	extracellular, plasma membrane, vacuole	13.19	14.95
HORVU4Hr1G026680.4	Barley	plastid	31.59	14.72
PGSC0003DMT400017301	Potato	golgi, plasma membrane	6.04	12.43
HORVU7Hr1G038700.9	Barley	nucleus, plastid	23.35	12.23
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	8.79	11.85
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	12.64	10.7

Protein Annotations

EnsemblPlants:HORVU5Hr1G076060.2	EnsemblPlantsGene:HORVU5Hr1G076060	GO:GO:0005575	GO:GO:0006810	GO:GO:0008150	GO:GO:0016020
GO:GO:0016021	GO:GO:0055085	InterPro:Mem_trans	PANTHER:PTHR31752	PANTHER:PTHR31752:SF15	PFAM:PF03547
SEG:seg	UniParc:UPI000B4747E4	UniProt:A0A287RUT0	MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	:

Description

No Description!

Coordinates

chrchr5H:+:549148914..549153494

Molecular Weight (calculated)

39237.3 Da

IEP (calculated)

12.609

GRAVY (calculated)

-0.380

Length

364 amino acids

Sequence
(BLAST)

001: MGRRVQGGGR HGAALLRPGP RLRLGAVVEA LHAGAVRRRE PPRGLLRGPL LRLRLRRAHG PLRAELPRPR RRRALQARRR AGARRLGRRV HALPRRRGAG
101: LLVVHHRLLS GDAEQHARGG RAAAGRHVRR VGARPRRADI GGADHRLLPA AAAGVRGQAC VRRRRREAGR GGGRRGGGRR CGGEEAARAG LAIGESGLAQ
201: GGAESQRVRG RPRGRMVVRH KQVAHCDSQH HRGIGADHVE DGGRTRHVQH GCLFMALQEK IIVCGAGLTA LGMALRFVAG PAATAAGAVA LGLRGDVLRL
301: AIIQAALPQS ITTFVFAKEY GLHADVLSTA GHIRDAGVAA RVDRVLYRPR LRWIVIRAPY LPRD

Best Arabidopsis Sequence Match ( AT5G16530.2 )
(BLAST)

001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTA

Arabidopsis Description

PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.