Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 3
- endoplasmic reticulum 3
- vacuole 3
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3B01G462900.1 | Wheat | plasma membrane | 93.47 | 97.28 |
| TraesCS3D01G421600.1 | Wheat | plasma membrane | 95.04 | 96.3 |
| TraesCS3A01G426700.1 | Wheat | plasma membrane | 94.78 | 96.29 |
| Os01t0919800-01 | Rice | plasma membrane | 81.98 | 86.5 |
| KXG33996 | Sorghum | plasma membrane | 83.55 | 85.11 |
| Zm00001d042345_P001 | Maize | plasma membrane | 83.55 | 83.77 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 58.22 | 69.47 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane, vacuole | 57.18 | 67.38 |
| Bra008615.1-P | Field mustard | golgi, plasma membrane, vacuole | 57.44 | 63.22 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 57.44 | 63.22 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 57.44 | 63.22 |
| AT5G16530.1 | Thale cress | plasma membrane | 57.7 | 62.96 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 56.66 | 62.36 |
| VIT_04s0023g00320.t01 | Wine grape | plasma membrane | 57.7 | 62.08 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 55.35 | 57.45 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 54.83 | 55.7 |
| CDX78697 | Canola | plasma membrane | 56.4 | 54.82 |
| HORVU5Hr1G076210.1 | Barley | plasma membrane | 47.26 | 49.05 |
| HORVU5Hr1G076120.2 | Barley | golgi, plasma membrane, vacuole | 30.03 | 42.59 |
| HORVU3Hr1G067670.3 | Barley | plasma membrane | 38.12 | 40.9 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 33.94 | 30.23 |
| HORVU3Hr1G057630.3 | Barley | plasma membrane | 45.69 | 29.26 |
| HORVU1Hr1G072970.9 | Barley | golgi, plasma membrane, vacuole | 44.65 | 29.23 |
| HORVU1Hr1G091030.2 | Barley | golgi, plasma membrane, vacuole | 43.6 | 27.51 |
| HORVU7Hr1G110470.7 | Barley | golgi, plasma membrane, vacuole | 45.17 | 27.29 |
| HORVU5Hr1G076060.2 | Barley | mitochondrion | 25.33 | 26.65 |
| HORVU6Hr1G076110.2 | Barley | plasma membrane | 38.9 | 24.79 |
| HORVU4Hr1G026680.4 | Barley | plastid | 44.91 | 22.02 |
| HORVU3Hr1G111420.1 | Barley | mitochondrion, plastid | 16.97 | 15.12 |
| HORVU7Hr1G038700.9 | Barley | nucleus, plastid | 21.41 | 11.8 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:HORVU3Hr1G094000 | EnsemblPlants:HORVU3Hr1G094000.3 | UniProt:M0XIU6 | InterPro:Mem_trans |
| PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF2 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix | UniParc:UPI000295C709 |
| SEG:seg | : | : | : | : | : |
Description
Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:M0XIU6]
Coordinates
chrchr3H:-:644812489..644817344
Molecular Weight (calculated)
40872.6 Da
IEP (calculated)
9.628
GRAVY (calculated)
0.745
Length
383 amino acids
Sequence
(BLAST)
(BLAST)
001: MIGWGDVYKV VAATAPLYFA LFLGYGSVRW WRIFTREQCD AVNRLVAFFA LPFFTFEFTL HTDPFQVNYR AVAADVISKA VIVAVIAVWA RFLGRNGGGK
101: GAAGWSITGF SLSTLTNSLV VGVPMARAMY GEWAQQLVVQ LSVFQAIVWL TLLLFVLEVR KAAIGMYVDV GKTSVVHDAP LPESPVKADV EAAAGNGAVA
201: VLVVGGGAQE VAVSVGGKPS VWRLVKTVAH KLARNPNTYA SFVGITWACV ANRLHIELPS VLENSVLIMS KSGTGMAMFS MGLFMAQQER ILACGPSYAA
301: LGLALKFGLG PVAMAIGSIA VGLRGDVLRV AIIQAALPQS ITSFIFAKEY GLHADVLSTA VIFGMLVSLP LLVGLYIVLE LIR
101: GAAGWSITGF SLSTLTNSLV VGVPMARAMY GEWAQQLVVQ LSVFQAIVWL TLLLFVLEVR KAAIGMYVDV GKTSVVHDAP LPESPVKADV EAAAGNGAVA
201: VLVVGGGAQE VAVSVGGKPS VWRLVKTVAH KLARNPNTYA SFVGITWACV ANRLHIELPS VLENSVLIMS KSGTGMAMFS MGLFMAQQER ILACGPSYAA
301: LGLALKFGLG PVAMAIGSIA VGLRGDVLRV AIIQAALPQS ITSFIFAKEY GLHADVLSTA VIFGMLVSLP LLVGLYIVLE LIR
001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
Arabidopsis Description
PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.