Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 5
- vacuole 6
- plasma membrane 7
- golgi 6
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 89.85 | 90.97 |
| GSMUA_Achr5P25210_001 | Banana | extracellular, golgi, vacuole | 70.46 | 70.25 |
| GSMUA_Achr5P25220_001 | Banana | golgi, plasma membrane, vacuole | 69.23 | 69.02 |
| VIT_04s0023g00320.t01 | Wine grape | plasma membrane | 75.08 | 68.54 |
| Bra008615.1-P | Field mustard | golgi, plasma membrane, vacuole | 70.77 | 66.09 |
| CDX69445 | Canola | golgi, plasma membrane, vacuole | 70.77 | 66.09 |
| CDY67254 | Canola | golgi, plasma membrane, vacuole | 70.77 | 66.09 |
| CDX70699 | Canola | golgi, plasma membrane, vacuole | 70.46 | 65.8 |
| AT5G16530.1 | Thale cress | plasma membrane | 69.54 | 64.39 |
| Os01t0919800-01 | Rice | plasma membrane | 68.62 | 61.43 |
| TraesCS3B01G462900.1 | Wheat | plasma membrane | 67.38 | 59.51 |
| KRH00905 | Soybean | golgi, plasma membrane, vacuole | 67.08 | 59.08 |
| KXG33996 | Sorghum | plasma membrane | 68.31 | 59.04 |
| CDX78697 | Canola | plasma membrane | 70.46 | 58.12 |
| TraesCS3D01G421600.1 | Wheat | plasma membrane | 67.38 | 57.94 |
| Zm00001d042345_P001 | Maize | plasma membrane | 68.0 | 57.85 |
| TraesCS3A01G426700.1 | Wheat | plasma membrane | 67.08 | 57.82 |
| KRH40330 | Soybean | golgi, plasma membrane, vacuole | 67.08 | 57.82 |
| HORVU3Hr1G094000.3 | Barley | plasma membrane | 67.38 | 57.18 |
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 41.23 | 43.65 |
| Os11t0122800-00 | Rice | plasma membrane | 35.69 | 39.19 |
| GSMUA_Achr9P15520_001 | Banana | plasma membrane | 47.69 | 39.04 |
| GSMUA_Achr5P25200_001 | Banana | cytosol, extracellular, plasma membrane | 18.15 | 37.58 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 39.69 | 35.34 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 50.77 | 34.09 |
| GSMUA_Achr1P15720_001 | Banana | plasma membrane | 51.38 | 32.55 |
| GSMUA_Achr8P23120_001 | Banana | plasma membrane | 49.23 | 31.75 |
| GSMUA_Achr3P22010_001 | Banana | plasma membrane | 47.69 | 30.57 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 50.15 | 29.85 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 51.08 | 29.8 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 52.31 | 29.21 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 48.62 | 28.68 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 49.54 | 28.3 |
| GSMUA_Achr3P07280_001 | Banana | plasma membrane | 50.77 | 28.21 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 52.31 | 28.01 |
| GSMUA_Achr8P08300_001 | Banana | plasma membrane | 48.92 | 27.8 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr11P19530_001 | EnsemblPlants:GSMUA_Achr11T19530_001 | EnsemblPlantsGene:GSMUA_Achr11G19530_001 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 |
| GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF2 |
| PFAM:PF03547 | SEG:seg | TMHMM:TMhelix | UniParc:UPI0002964A24 | UniProt:M0RTN3 | MapMan:11.2.4.1.1 |
| MapMan:24.2.5.2.1 | : | : | : | : | : |
Description
Putative auxin efflux carrier component 8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G19530_001]
Coordinates
chr11:-:20628933..20630866
Molecular Weight (calculated)
35100.6 Da
IEP (calculated)
8.193
GRAVY (calculated)
0.771
Length
325 amino acids
Sequence
(BLAST)
(BLAST)
001: MISWGDIYKV VVAMAPLYVA LGLGYGSVRW WRIITPEQCE AINRLVSCIT LPLFTFEFTL HVDPFAMNYR FIAADAVSKV TIAVLLAAWP KCSSKGSYCW
101: SVTSFSLSTL TNSLVVGVPL VSAMYGRWAQ DLVVQLSVLA SVESPPLKDV DGGGPEVTPR PSFWSLMKTV WLKLALNPNS YASIVGITWA FIASRWHFEM
201: PSIMEGSVLI MSKAGTGMAM FSMGLFMALQ EKILACGPSL TAFGMVLKFI AGPAATAIGA IAVGLRGDVL HLAIIQAALP QSITSFIFAR EYGLHADVLS
301: TAVIFGMLVS LPVLVAYYVV LGFMS
101: SVTSFSLSTL TNSLVVGVPL VSAMYGRWAQ DLVVQLSVLA SVESPPLKDV DGGGPEVTPR PSFWSLMKTV WLKLALNPNS YASIVGITWA FIASRWHFEM
201: PSIMEGSVLI MSKAGTGMAM FSMGLFMALQ EKILACGPSL TAFGMVLKFI AGPAATAIGA IAVGLRGDVL HLAIIQAALP QSITSFIFAR EYGLHADVLS
301: TAVIFGMLVS LPVLVAYYVV LGFMS
001: MINCGDVYKV IEAMVPLYVA LILGYGSVKW WHIFTRDQCD AINRLVCYFT LPLFTIEFTA HVDPFNMNYR FIAADVLSKV IIVTVLALWA KYSNKGSYCW
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
101: SITSFSLCTL TNSLVVGVPL AKAMYGQQAV DLVVQSSVFQ AIVWLTLLLF VLEFRKAGFS SNNISDVQVD NINIESGKRE TVVVGEKSFL EVMSLVWLKL
201: ATNPNCYSCI LGIAWAFISN RWHLELPGIL EGSILIMSKA GTGTAMFNMG IFMALQEKLI VCGTSLTVMG MVLKFIAGPA AMAIGSIVLG LHGDVLRVAI
301: IQAALPQSIT SFIFAKEYGL HADVLSTAVI FGMLVSLPVL VAYYAALEFI H
Arabidopsis Description
PIN5Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A178UIR3]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.