Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, golgi, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 6
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 63.29 | 75.24 |
| TraesCS3B01G361500.1 | Wheat | plasma membrane | 58.08 | 49.53 |
| Os01t0802700-01 | Rice | plasma membrane | 57.81 | 49.53 |
| TraesCS3D01G324800.1 | Wheat | plasma membrane | 57.81 | 48.96 |
| TraesCS7B01G359300.1 | Wheat | plasma membrane, vacuole | 53.42 | 48.87 |
| TraesCS3A01G331300.1 | Wheat | plasma membrane | 57.81 | 48.84 |
| HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 57.26 | 48.6 |
| TraesCS7B01G331500.1 | Wheat | cytosol, plasma membrane, vacuole | 53.97 | 48.52 |
| EES03766 | Sorghum | golgi, plasma membrane, vacuole | 57.53 | 47.3 |
| TraesCS7B01G359200.1 | Wheat | plasma membrane | 50.41 | 46.82 |
| Zm00001d043179_P001 | Maize | plasma membrane | 56.71 | 46.31 |
| GSMUA_Achr9P15520_001 | Banana | plasma membrane | 47.12 | 43.32 |
| TraesCS7D01G446900.1 | Wheat | plasma membrane | 33.15 | 42.46 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 35.34 | 40.19 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane, vacuole | 35.34 | 39.69 |
| GSMUA_Achr5P25220_001 | Banana | golgi, plasma membrane, vacuole | 35.07 | 39.26 |
| GSMUA_Achr5P25210_001 | Banana | extracellular, golgi, vacuole | 34.52 | 38.65 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 49.59 | 37.4 |
| GSMUA_Achr8P23120_001 | Banana | plasma membrane | 49.59 | 35.91 |
| GSMUA_Achr1P15720_001 | Banana | plasma membrane | 49.04 | 34.89 |
| GSMUA_Achr3P22010_001 | Banana | plasma membrane | 47.67 | 34.32 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 50.41 | 33.7 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 50.96 | 33.39 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 49.59 | 32.85 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 50.68 | 32.51 |
| GSMUA_Achr3P07280_001 | Banana | plasma membrane | 50.68 | 31.62 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 49.86 | 31.27 |
| GSMUA_Achr8P08300_001 | Banana | plasma membrane | 47.95 | 30.59 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 49.59 | 29.82 |
| GSMUA_Achr5P25200_001 | Banana | cytosol, extracellular, plasma membrane | 11.51 | 26.75 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_AchrUn_randomG08290_001 | EnsemblPlants:GSMUA_AchrUn_randomP08290_001 | EnsemblPlants:GSMUA_AchrUn_randomT08290_001 | UniProt:M0U7E0 |
| InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF9 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix |
| UniParc:UPI00029620F4 | SEG:seg | : | : | : | : |
Description
Probable auxin efflux carrier component 5 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG08290_001]
Coordinates
chrchrUn_random:-:36129697..36132403
Molecular Weight (calculated)
39904.2 Da
IEP (calculated)
8.576
GRAVY (calculated)
0.855
Length
365 amino acids
Sequence
(BLAST)
(BLAST)
001: MISWSSLYHV VEAMMPLYAA MALGYASVRK KAFTPEQCAG INHFVALLAV PLLIFRMISS NNPYTMNIRF LAADTLQKVI ILAALAAWAR FSNNGSIAWV
101: ITLFSLATLP NTVLMGVPVL RGMYGPMSEN LMVQIVVLQF VVWYVLVVFL FEYMAAQNAF MEQQQMPPPQ ANGSHSVDIP AVNADGSDPD VSIAQEETIR
201: PSGMLILVMA VKKILKIPST YASLLGLFWS LIAFRFGIKM PAIIDNSLSI ISVSAIGLGM FSVGAFMAQR KKFITCGYYL AVLAMVMRFL IGPIVMLVSS
301: FAVGLQGVFL NVGVVQAALP LAVLSFVYAE EYNVHPDIMS TGVIVGIFIS VPLTILYYVL LGLER
101: ITLFSLATLP NTVLMGVPVL RGMYGPMSEN LMVQIVVLQF VVWYVLVVFL FEYMAAQNAF MEQQQMPPPQ ANGSHSVDIP AVNADGSDPD VSIAQEETIR
201: PSGMLILVMA VKKILKIPST YASLLGLFWS LIAFRFGIKM PAIIDNSLSI ISVSAIGLGM FSVGAFMAQR KKFITCGYYL AVLAMVMRFL IGPIVMLVSS
301: FAVGLQGVFL NVGVVQAALP LAVLSFVYAE EYNVHPDIMS TGVIVGIFIS VPLTILYYVL LGLER
001: MISWLDIYHV VSATVPLYVS MTLGFLSARH LKLFSPEQCA GINKFVAKFS IPLLSFQIIS ENNPFKMSPK LILSDILQKF LVVVVLAMVL RFWHPTGGRG
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
101: GKLGWVITGL SISVLPNTLI LGMPILSAIY GDEAASILEQ IVVLQSLIWY TILLFLFELN AARALPSSGA SLEHTGNDQE EANIEDEPKE EEDEEEVAIV
201: RTRSVGTMKI LLKAWRKLII NPNTYATLIG IIWATLHFRL GWNLPEMIDK SIHLLSDGGL GMAMFSLGLF MASQSSIIAC GTKMAIITML LKFVLGPALM
301: IASAYCIRLK STLFKVAILQ AALPQGVVPF VFAKEYNLHP EIISTGVIFG MLIALPTTLA YYFLLDL
Arabidopsis Description
PIN8Auxin efflux carrier component 8 [Source:UniProtKB/Swiss-Prot;Acc:Q9LFP6]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.