Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 5
Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
TraesCS3B01G361500.1 | Wheat | plasma membrane | 95.82 | 96.5 |
TraesCS3A01G331300.1 | Wheat | plasma membrane | 96.52 | 96.3 |
HORVU3Hr1G078620.1 | Barley | endoplasmic reticulum, plasma membrane, vacuole | 92.81 | 93.02 |
Os01t0802700-01 | Rice | plasma membrane | 74.25 | 75.12 |
EES03766 | Sorghum | golgi, plasma membrane, vacuole | 73.55 | 71.4 |
Zm00001d043179_P001 | Maize | plasma membrane | 71.0 | 68.46 |
TraesCS7D01G446900.1 | Wheat | plasma membrane | 44.32 | 67.02 |
GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 45.01 | 63.19 |
GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 48.96 | 57.81 |
TraesCS3D01G247700.1 | Wheat | plasma membrane | 33.87 | 40.9 |
TraesCS5D01G291800.1 | Wheat | extracellular, plasma membrane, vacuole | 31.55 | 37.06 |
TraesCS7D01G259700.1 | Wheat | plasma membrane, vacuole | 32.25 | 36.58 |
TraesCS3D01G421600.1 | Wheat | plasma membrane | 30.16 | 34.39 |
TraesCS5D01G293000.1 | Wheat | golgi, plasma membrane, vacuole | 29.93 | 34.22 |
TraesCS5D01G293300.1 | Wheat | plasma membrane | 29.93 | 34.22 |
TraesCS5D01G293100.1 | Wheat | golgi, plasma membrane, vacuole | 30.16 | 33.59 |
TraesCS4D01G125300.1 | Wheat | plasma membrane | 40.84 | 31.1 |
TraesCS7D01G191600.1 | Wheat | plasma membrane | 41.53 | 30.55 |
TraesCS6D01G287800.1 | Wheat | plasma membrane | 41.53 | 30.39 |
TraesCS1D01G422900.1 | Wheat | golgi, plasma membrane, vacuole | 40.14 | 29.03 |
TraesCS3D01G221900.1 | Wheat | plasma membrane | 38.98 | 28.47 |
TraesCS7D01G478800.1 | Wheat | golgi, plasma membrane, vacuole | 38.05 | 25.91 |
Protein Annotations
EnsemblPlants:TraesCS3D01G324800.1 | EnsemblPlantsGene:TraesCS3D01G324800 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0008150 | GO:GO:0016020 |
GO:GO:0016021 | GO:GO:0055085 | InterPro:Mem_trans | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF9 | PFAM:PF03547 |
SEG:seg | TMHMM:TMhelix | MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | : | : |
Description
No Description!
Coordinates
chr3D:-:437732961..437734963
Molecular Weight (calculated)
45929.8 Da
IEP (calculated)
9.159
GRAVY (calculated)
0.597
Length
431 amino acids
Sequence
(BLAST)
(BLAST)
001: MITWLAVYHV VEAMAPLYTA AVLGYASVRW LKAFSEEQCA GINHFVAIYA VPVLIFNMVS TNNPYAMNGR LVAADTLQKA VMLLGLVAWA AWESRSRRRR
101: PSIGGGKASA SAAAASPLQW VVTAFSVASL PNTIIMGVPL LGGMYGAMSK DLMKQIVVMQ FCVWYNVVIF IYEYMAARRA ATAMDGTAKI SPGSPGAAPS
201: AEKIAPNDEA IVAAKRAHEV TVNIEITEVA PASTVQKDLA DNTTTTVARE MSTDAEEASP PPPAKSTAPS VTHIALMAGK KVLKIPNTYA SFLGLIWALI
301: AFKCGIKMPK IIDDSLFTIQ TTAVGLSMFA SGTFIARQSR FVPCGYAIAS VSMVLKFLVG PVVMLLASLA IGMHGTLLHI AVVQAALPLA VTSFVYAEEY
401: KVHADIMSTG VILGIFISLP VTIVYYILLG L
101: PSIGGGKASA SAAAASPLQW VVTAFSVASL PNTIIMGVPL LGGMYGAMSK DLMKQIVVMQ FCVWYNVVIF IYEYMAARRA ATAMDGTAKI SPGSPGAAPS
201: AEKIAPNDEA IVAAKRAHEV TVNIEITEVA PASTVQKDLA DNTTTTVARE MSTDAEEASP PPPAKSTAPS VTHIALMAGK KVLKIPNTYA SFLGLIWALI
301: AFKCGIKMPK IIDDSLFTIQ TTAVGLSMFA SGTFIARQSR FVPCGYAIAS VSMVLKFLVG PVVMLLASLA IGMHGTLLHI AVVQAALPLA VTSFVYAEEY
401: KVHADIMSTG VILGIFISLP VTIVYYILLG L
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGESSF YSVSFFR
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.