Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr3P07280_001 | Banana | plasma membrane | 87.7 | 75.56 |
| GSMUA_Achr9P15520_001 | Banana | plasma membrane | 54.56 | 69.27 |
| GSMUA_Achr9P27160_001 | Banana | plasma membrane | 74.21 | 67.88 |
| GSMUA_Achr7P07300_001 | Banana | golgi, plasma membrane | 73.81 | 65.38 |
| GSMUA_Achr8P09440_001 | Banana | plasma membrane | 69.05 | 63.74 |
| GSMUA_Achr8P29780_001 | Banana | golgi, plasma membrane, vacuole | 59.52 | 61.98 |
| GSMUA_Achr2P00910_001 | Banana | golgi, plasma membrane, vacuole | 67.06 | 60.68 |
| GSMUA_Achr1P15720_001 | Banana | plasma membrane | 60.12 | 59.06 |
| GSMUA_Achr4P00310_001 | Banana | golgi, plasma membrane, vacuole | 35.32 | 57.98 |
| GSMUA_Achr7P17140_001 | Banana | plasma membrane | 65.08 | 56.36 |
| GSMUA_Achr1P25190_001 | Banana | golgi, plasma membrane, vacuole | 67.66 | 56.18 |
| GSMUA_Achr3P22010_001 | Banana | plasma membrane | 51.59 | 51.28 |
| GSMUA_AchrUn_... | Banana | golgi, plasma membrane, vacuole | 35.91 | 49.59 |
| GSMUA_Achr11P... | Banana | extracellular, plasma membrane, vacuole | 31.55 | 49.53 |
| GSMUA_Achr11P... | Banana | golgi, plasma membrane, vacuole | 31.75 | 49.23 |
| GSMUA_Achr5P25220_001 | Banana | golgi, plasma membrane, vacuole | 31.75 | 49.08 |
| GSMUA_Achr5P25210_001 | Banana | extracellular, golgi, vacuole | 31.55 | 48.77 |
| GSMUA_Achr8P08300_001 | Banana | plasma membrane | 53.57 | 47.2 |
| GSMUA_Achr5P25200_001 | Banana | cytosol, extracellular, plasma membrane | 10.32 | 33.12 |
Protein Annotations
| MapMan:11.2.4.1.1 | MapMan:24.2.5.2.1 | InterPro:Auxin_eff_plant | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0007154 |
| GO:GO:0007165 | GO:GO:0008150 | GO:GO:0009719 | GO:GO:0009734 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0055085 | EnsemblPlantsGene:GSMUA_Achr8G23120_001 | EnsemblPlants:GSMUA_Achr8P23120_001 | EnsemblPlants:GSMUA_Achr8T23120_001 | UniProt:M0TSW5 |
| InterPro:Mem_trans | PFAM:PF03547 | PANTHER:PTHR31752 | PANTHER:PTHR31752:SF14 | TIGRFAMs:TIGR00946 | TMHMM:TMhelix |
| UniParc:UPI000295B48C | : | : | : | : | : |
Description
Auxin efflux carrier component 4 [Source:GMGC_GENE;Acc:GSMUA_Achr8G23120_001]
Coordinates
chr8:+:27659371..27662116
Molecular Weight (calculated)
54910.4 Da
IEP (calculated)
9.017
GRAVY (calculated)
0.397
Length
504 amino acids
Sequence
(BLAST)
(BLAST)
001: MITGADFYHV MTAVVPLYVA MILAYGSVKW WKIFTPDQCS GINRFVALFA VPLLSFHFIS TNNPYEMNMR FIAADTLQKL MVLAMLAAWN RLSRRGSLEW
101: TITIFSLSTL PNTLVMGIPL LKGMYGSYSG SLMVQIVVLQ CIIWYTLMLF LFEYRAARIL ITEQFPDTAG AIANPTPRGS SFNHTDFYSM VGRSSNFGAA
201: DSKISYQLPA TAGTPHYPAP NPSANGQAPV FKAEDGGTKD LHMFVWSSSA SPVSDVFVGS NNHHHEYGFP SVVPSALKEV RVAVSPGRME GRKENPADCL
301: ERDDFSFGNK GDGCGHDAVD DKVQGPAKAG LTRVTTMPPT SVMTRLILIM VWRKLIRNPN TYSSLIGVVW SLISFKWQVN MPDIVSGSIS ILSDAGLGMA
401: MFSLGLFMAL QPRIIACGNS VAAFAMAVRF LTGPAVMAAA SIAVGLRGVL LRIAIVQASL PQGIVPFVFA KEYNLHPDIL STAVIFGMLI ALPITLVYYI
501: LLGL
101: TITIFSLSTL PNTLVMGIPL LKGMYGSYSG SLMVQIVVLQ CIIWYTLMLF LFEYRAARIL ITEQFPDTAG AIANPTPRGS SFNHTDFYSM VGRSSNFGAA
201: DSKISYQLPA TAGTPHYPAP NPSANGQAPV FKAEDGGTKD LHMFVWSSSA SPVSDVFVGS NNHHHEYGFP SVVPSALKEV RVAVSPGRME GRKENPADCL
301: ERDDFSFGNK GDGCGHDAVD DKVQGPAKAG LTRVTTMPPT SVMTRLILIM VWRKLIRNPN TYSSLIGVVW SLISFKWQVN MPDIVSGSIS ILSDAGLGMA
401: MFSLGLFMAL QPRIIACGNS VAAFAMAVRF LTGPAVMAAA SIAVGLRGVL LRIAIVQASL PQGIVPFVFA KEYNLHPDIL STAVIFGMLI ALPITLVYYI
501: LLGL
001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL
Arabidopsis Description
PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.