Factsheet for HORVU1Hr1G072970.9

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, golgi, vacuole

Predictor Summary:

extracellular 3
endoplasmic reticulum 3
vacuole 4
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	golgi
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU1Hr1G091030.2	Barley	golgi, plasma membrane, vacuole	87.18	84.02
TraesCS1D01G422900.1	Wheat	golgi, plasma membrane, vacuole	85.47	83.89
TraesCS1B01G445400.1	Wheat	golgi, plasma membrane, vacuole	84.96	83.25
TraesCS1A01G415400.1	Wheat	golgi, plasma membrane, vacuole	83.93	81.97
Os05t0576900-01	Rice	golgi, plasma membrane, vacuole	66.32	65.65
Zm00001d045219_P001	Maize	plasma membrane	64.96	65.4
EER89254	Sorghum	golgi, plasma membrane, vacuole	66.84	65.17
HORVU3Hr1G111420.1	Barley	mitochondrion, plastid	47.01	63.95
GSMUA_Achr8P29780_001	Banana	golgi, plasma membrane, vacuole	48.89	59.09
HORVU3Hr1G057630.3	Barley	plasma membrane	58.12	56.86
HORVU3Hr1G067670.3	Barley	plasma membrane	31.11	50.98
HORVU6Hr1G076110.2	Barley	plasma membrane	49.74	48.42
HORVU7Hr1G110470.7	Barley	golgi, plasma membrane, vacuole	52.31	48.27
HORVU3Hr1G094000.3	Barley	plasma membrane	29.23	44.65
HORVU5Hr1G076210.1	Barley	plasma membrane	26.84	42.55
HORVU4Hr1G026680.4	Barley	plastid	53.5	40.08
HORVU3Hr1G078620.1	Barley	endoplasmic reticulum, plasma membrane, vacuole	28.55	38.84
HORVU5Hr1G076120.2	Barley	golgi, plasma membrane, vacuole	14.36	31.11
HORVU5Hr1G076060.2	Barley	mitochondrion	18.46	29.67
HORVU7Hr1G038700.9	Barley	nucleus, plastid	22.56	18.99

Protein Annotations

MapMan:11.2.4.1.1	MapMan:24.2.5.2.1	UniProt:A0A287G7E6	InterPro:Auxin_eff_plant	GO:GO:0005575	GO:GO:0006810
GO:GO:0007154	GO:GO:0007165	GO:GO:0008150	GO:GO:0009719	GO:GO:0009734	GO:GO:0009987
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EnsemblPlantsGene:HORVU1Hr1G072970	EnsemblPlants:HORVU1Hr1G072970.9	InterPro:Mem_trans
PFAM:PF03547	PANTHER:PTHR31752	PANTHER:PTHR31752:SF16	TIGRFAMs:TIGR00946	TMHMM:TMhelix	UniParc:UPI000B46ACBF
SEG:seg	:	:	:	:	:

Description

Auxin efflux carrier component [Source:UniProtKB/TrEMBL;Acc:A0A287G7E6]

Coordinates

chrchr1H:+:500134362..500136504

Molecular Weight (calculated)

62501.0 Da

IEP (calculated)

7.947

GRAVY (calculated)

0.392

Length

585 amino acids

Sequence
(BLAST)

001: MISWHDLYTV LAAVVPLYVA MILAYGSVRW WGVITADQCA GINRFVAVFA VPLLSFKFIS GSDLYAMDLR FAAADTLQKL IILAALAVWS RLPLPFPSGG
101: GLDWSITLFS FATLPNTLIM GIPLLVGMYG RHAGDLMVQL IVLQCIIWYT LLLFLFEFRA ARLLISGRFP AAAVADVAVD PDVTSLDSSH AEAQAHVAPD
201: GSMRVVVRRS TASLSRRSLL NDTVAGMSSP PRASNLTGVE FYSVTSSRNH SSSFTHDDFS ATTGGGGAAA TLSPLRVSSR ANLLSLHTSW QQTLMPSARY
301: DEHAPRGRSA AVVAPVDDSM DNLHMYDWSS GASGASEGSG LPVFGNGAKD SGRRRATSDA LSINSDSSRL NRPGTTDGER AKSEAAAQDS LERLEAGTEA
401: TEKEQDQTTK DGCEVGGPPA SVMVRLILTM VWRRLIRNPN TYASVVGLVW SLIEFRYHVT MPTIVANSIS ILSNAGLGMA MFSLGLFMAM QPKLIACGNS
501: IAASTMAVRF LLGPAVMAAA SVAVGLRGTL LRIAIVQAAL PQGIVPFVFA KEYNLHAAIL CTGVIFGMLI ALPIVMVYYI ILGLL

Best Arabidopsis Sequence Match ( AT1G23080.3 )
(BLAST)

001: MITWHDLYTV LTAVIPLYVA MILAYGSVRW WKIFSPDQCS GINRFVAIFA VPLLSFHFIS SNNPYAMNLR FIAADTLQKL IMLTLLIIWA NFTRSGSLEW
101: SITIFSLSTL PNTLVMGIPL LIAMYGEYSG SLMVQIVVLQ CIIWYTLLLF LFEYRGAKIL IMEQFPETGA SIVSFKVESD VVSLDGHDFL ETDAQIGDDG
201: KLHVTVRKSN ASRRSFYGGG GTNMTPRPSN LTGAEIYSLN TTPRGSNFNH SDFYSMMGFP GGRLSNFGPA DMYSVQSSRG PTPRPSNFEE SCAMASSPRF
301: GYYPGGAPGS YPAPNPEFST GNKTGSKAPK ENHHHVGKSN SNDAKELHMF VWGSNGSPVS DRAGLQVDNG ANEQVGKSDQ GGAKEIRMLI SDHTQNAGPM
401: NGDYGGEEES ERVKEVPNGL HKLRCNSTAE LNPKEAIETG ETVPVKHMPP ASVMTRLILI MVWRKLIRNP NTYSSLIGLI WALVAFRWDV AMPKIIQQSI
501: SILSDAGLGM AMFSLGLFMA LQPKLIACGN STATFAMAVR FFTGPAVMAV AAMAIGLRGD LLRVAIVQAA LPQGIVPFVF AKEYNVHPAI LSTGVIFGML
601: IALPITLVYY ILLGL

Arabidopsis Description

PIN7Auxin efflux carrier component 7 [Source:UniProtKB/Swiss-Prot;Acc:Q940Y5]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.